Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU5B-2P-201ENST00000363036 113 ntBASIC3.31□□□□□ -1.88
SHROOM4Q9ULL8 RPL21P1-201ENST00000399532 476 ntBASIC3.31□□□□□ -1.88
SHROOM4Q9ULL8 Y_RNA.619-201ENST00000410951 90 ntBASIC3.31□□□□□ -1.88
SHROOM4Q9ULL8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM4Q9ULL8 AC130509.1-201ENST00000464158 433 ntBASIC3.31□□□□□ -1.88
SHROOM4Q9ULL8 AC079804.2-201ENST00000490376 200 ntBASIC3.31□□□□□ -1.88
SHROOM4Q9ULL8 SNORA31.11-201ENST00000516528 139 ntBASIC3.31□□□□□ -1.88
SHROOM4Q9ULL8 AC018638.8-201ENST00000588755 281 ntBASIC3.31□□□□□ -1.88
SHROOM4Q9ULL8 AC124303.1-201ENST00000605703 360 ntBASIC3.31□□□□□ -1.88
SHROOM4Q9ULL8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHROOM4Q9ULL8 SNORA16.1-201ENST00000364597 132 ntBASIC3.3□□□□□ -1.88
SHROOM4Q9ULL8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM4Q9ULL8 MTCO2P30-201ENST00000503662 364 ntBASIC3.3□□□□□ -1.88
SHROOM4Q9ULL8 RNU6-566P-201ENST00000516790 107 ntBASIC3.3□□□□□ -1.88
SHROOM4Q9ULL8 RNU1-40P-201ENST00000516816 164 ntBASIC3.3□□□□□ -1.88
SHROOM4Q9ULL8 RNU1-97P-201ENST00000516872 164 ntBASIC3.3□□□□□ -1.88
SHROOM4Q9ULL8 MTND4LP26-201ENST00000518144 282 ntBASIC3.3□□□□□ -1.88
SHROOM4Q9ULL8 MIR502-201ENST00000606349 86 ntBASIC3.3□□□□□ -1.88
SHROOM4Q9ULL8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.3□□□□□ -1.88
SHROOM4Q9ULL8 Y_RNA.135-201ENST00000363439 95 ntBASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 MIR517A-201ENST00000385001 87 ntBASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 RNU7-14P-201ENST00000459331 62 ntBASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 RNU2-44P-201ENST00000516795 194 ntBASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 AC130454.1-201ENST00000622948 401 ntBASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 AC008555.8-201ENST00000623602 2168 ntBASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SHROOM4Q9ULL8 RNU1-58P-201ENST00000362413 163 ntBASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 AL590632.1-201ENST00000424289 371 ntBASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 DAP3P1-201ENST00000441522 278 ntBASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 RPL23AP75-201ENST00000491601 451 ntBASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 AC121758.2-201ENST00000553271 193 ntBASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 MIR3942-201ENST00000585264 109 ntBASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 7SK.7-201ENST00000603504 247 ntBASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 RNU6-831P-201ENST00000384548 107 ntBASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 RNU6-160P-201ENST00000384591 107 ntBASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 RPS4XP11-201ENST00000446897 772 ntBASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 SNORA59B-202ENST00000578183 701 ntBASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.28□□□□□ -1.88
SHROOM4Q9ULL8 ZNF702P-202ENST00000434269 1966 ntBASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 MIR613-201ENST00000385248 95 ntBASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 RNA5SP465-201ENST00000391195 109 ntBASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 Y_RNA.599-201ENST00000410489 109 ntBASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 RNU6-1098P-201ENST00000516772 96 ntBASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 RNU6-273P-201ENST00000516937 96 ntBASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 AC087441.2-201ENST00000529141 262 ntBASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 ANP32BP3-201ENST00000559213 706 ntBASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 MIR5694-201ENST00000581190 76 ntBASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHROOM4Q9ULL8 Y_RNA.132-201ENST00000363421 102 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 Y_RNA.332-201ENST00000365271 113 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 MIR320B2-201ENST00000408479 138 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 AC123900.1-201ENST00000420390 96 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 BX510359.4-201ENST00000423750 193 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 snoU13.6-201ENST00000458785 104 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 RNU4-49P-201ENST00000516080 140 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 RNU6-358P-201ENST00000516564 75 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 RNU6-1088P-201ENST00000516850 104 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 RNU6-1198P-201ENST00000516904 67 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 RNA5SP454-201ENST00000517231 127 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 MIR4273-201ENST00000582824 84 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 U1.36-201ENST00000620684 176 ntBASIC3.26□□□□□ -1.89
SHROOM4Q9ULL8 AC245060.5-201ENST00000610778 3293 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 Y_RNA.301-201ENST00000364990 103 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 Y_RNA.505-201ENST00000384489 102 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 AL512604.1-201ENST00000404812 257 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 RPS26P42-201ENST00000413485 326 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 AL035666.1-201ENST00000446195 348 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 NFU1P2-201ENST00000448700 469 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 FGF7P6-202ENST00000451282 293 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 OR2AQ1P-201ENST00000451972 200 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 AC090255.1-201ENST00000495779 349 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 MIR4419B-201ENST00000577260 68 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 MIR4287-201ENST00000579398 78 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 SNRPGP20-201ENST00000604477 205 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 MIR6840-201ENST00000611937 71 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 RMST_6.1-201ENST00000611980 203 ntBASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHROOM4Q9ULL8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms