Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 MRPS36P4-201ENST00000534436 298 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 HSBP1P1-201ENST00000555205 166 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 CTHRC1P1-201ENST00000605383 469 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 AC005562.2-201ENST00000618264 111 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 AC137590.2-201ENST00000619709 240 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.100-201ENST00000363141 102 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 RNU4-42P-201ENST00000364738 142 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.338-201ENST00000365320 114 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 RNU6-997P-201ENST00000384725 107 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 RNU6-373P-201ENST00000411247 98 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 ZNF885P-201ENST00000420174 1098 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 AL513185.2-201ENST00000425543 193 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 MTCO1P44-201ENST00000441935 243 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 AL353572.1-201ENST00000442490 417 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 OR2AQ1P-201ENST00000451972 200 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 RNU7-95P-201ENST00000459222 64 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 SUB1P4-201ENST00000566062 339 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 AC012557.2-201ENST00000605919 418 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 RMST_3.1-201ENST00000611651 109 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 TCL6_2.1-201ENST00000615162 119 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 MTND5P9-201ENST00000503854 1755 ntBASIC1.36□□□□□ -2.19
CLCF1Q9UBD9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AL159152.1-201ENST00000635019 2587 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 RNU6-1252P-201ENST00000363054 104 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 RNU4-13P-201ENST00000364019 141 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 RNU6-1090P-201ENST00000364065 94 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 RNU6-790P-201ENST00000384479 105 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 RNU6-332P-201ENST00000391193 108 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 RNU6-174P-201ENST00000410406 106 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 MTCO1P21-201ENST00000416634 589 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 MTCO3P46-201ENST00000425787 232 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AL357134.1-201ENST00000445848 426 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 PCMTD1P1-201ENST00000455560 355 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AC112492.4-201ENST00000456549 352 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 RNU7-187P-201ENST00000458985 68 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AC010531.2-201ENST00000465012 153 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AC097473.1-201ENST00000508142 408 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 RNU6-720P-201ENST00000516363 108 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 SNORA44.1-201ENST00000517031 108 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 MTND1P35-201ENST00000526739 508 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AC015720.1-201ENST00000565251 277 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 EIF1P4-201ENST00000572664 335 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 MIR5006-201ENST00000583027 110 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AC023043.2-201ENST00000589678 1026 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AC016727.2-201ENST00000603988 621 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AP000907.4-201ENST00000604143 237 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 MIR3976-201ENST00000606807 139 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AC103810.8-201ENST00000607347 118 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AC083806.3-201ENST00000614016 455 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 AC022513.1-201ENST00000624512 117 ntBASIC1.35□□□□□ -2.19
CLCF1Q9UBD9 RNU6-545P-201ENST00000362681 104 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 RNY4P14-201ENST00000363656 96 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 RNU4-40P-201ENST00000364351 143 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 MIR320B2-201ENST00000408479 138 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 MIR1283-1-201ENST00000408494 87 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 RPL23AP36-201ENST00000413895 458 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 Z82205.1-201ENST00000428456 297 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 HMGB1P18-201ENST00000438801 619 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 MTCO3P18-201ENST00000440206 761 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 AC004386.2-201ENST00000441858 148 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 ATP5J2P3-201ENST00000451550 258 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 AC007215.1-201ENST00000464893 276 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 AC087477.1-201ENST00000465747 340 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 FAM206BP-201ENST00000510179 541 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 AC108729.3-201ENST00000513484 108 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 RNU6-256P-201ENST00000516747 97 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 DEFB131C-201ENST00000528817 165 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 AC016957.1-201ENST00000534895 309 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 MIR5094-201ENST00000578766 85 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 MIR4753-201ENST00000585119 83 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 SNRPGP20-201ENST00000604477 205 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 AC093783.1-201ENST00000612976 329 ntBASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 AL138726.1-201ENST00000614873 333 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms