Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 AL133255.1-201ENST00000606374 441 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-874P-201ENST00000362390 105 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-222P-201ENST00000362438 107 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 RNU4-82P-201ENST00000362443 140 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-873P-201ENST00000363833 107 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 Y_RNA.364-201ENST00000365532 101 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 Y_RNA.431-201ENST00000384086 102 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-1026P-201ENST00000384465 108 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 AC026436.1-201ENST00000510537 270 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 ANP32BP3-201ENST00000559213 706 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 UBL5P4-201ENST00000562584 236 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 AL031274.2-201ENST00000599419 203 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 AC022202.1-201ENST00000613515 211 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
SLC6A13Q9NSD5 AC016717.2-201ENST00000609089 5141 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 Y_RNA.99-201ENST00000363138 105 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 SNORD31B-201ENST00000364977 69 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 Y_RNA.332-201ENST00000365271 113 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 SNORD14D-201ENST00000384390 87 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 MIR10B-201ENST00000385011 110 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 RN7SKP284-201ENST00000411002 343 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 RNA5SP270-201ENST00000411361 118 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 AC004866.1-201ENST00000411748 78 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 AC245102.2-201ENST00000448956 180 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 SNORA25.14-201ENST00000516481 132 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 AC090617.3-201ENST00000573670 475 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 CYP2C61P-201ENST00000604072 290 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 AC080078.3-201ENST00000605407 463 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 MIR1244-1-201ENST00000612829 85 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 U4.3-201ENST00000621047 82 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 MIR1291-201ENST00000627649 87 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 MIR1244-3-201ENST00000635744 85 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 MIR1244-2-201ENST00000636449 85 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 MIR1244-4-202ENST00000636813 85 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.22□□□□□ -2.05
SLC6A13Q9NSD5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 RNU6-438P-201ENST00000365561 103 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 SNORA6-201ENST00000384033 151 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 MIR625-201ENST00000385047 85 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 MIR300-201ENST00000401138 83 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 MIR1262-201ENST00000408276 93 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 RNU6-1156P-201ENST00000410365 100 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 AC009963.1-201ENST00000417265 157 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 WARS2P1-201ENST00000429678 537 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 AC018634.1-201ENST00000437554 401 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 IFNA11P-201ENST00000446352 526 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 AC016925.1-201ENST00000458303 298 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 MIR2053-201ENST00000459295 91 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 RNU7-87P-201ENST00000459343 62 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 MTND5P16-201ENST00000460269 1703 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 RNA5SP148-201ENST00000516527 94 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 RNU6-344P-201ENST00000516635 111 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 MIR4435-1-201ENST00000582552 80 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 AC073544.1-201ENST00000600110 1595 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 AC103810.6-201ENST00000606708 136 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 AC116312.1-201ENST00000606841 314 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 AC046143.2-201ENST00000609789 160 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 AC013412.1-201ENST00000610687 192 ntBASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SLC6A13Q9NSD5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AC005336.3-201ENST00000623833 2679 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 RNU6-1115P-201ENST00000362490 106 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 RNA5SP68-201ENST00000363885 119 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 Y_RNA.535-201ENST00000384612 99 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 MIR29C-201ENST00000385231 88 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 Y_RNA.579-201ENST00000390939 94 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AC123900.1-201ENST00000420390 96 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AL445305.1-201ENST00000432577 575 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 RPS15AP28-201ENST00000435088 386 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AC099799.1-201ENST00000439809 192 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AC096638.1-201ENST00000444678 216 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AL513328.1-201ENST00000446460 224 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 RNU7-4P-201ENST00000516961 62 ntBASIC2.2□□□□□ -2.06
SLC6A13Q9NSD5 AC009127.3-201ENST00000570531 403 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms