Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 U6atac.2-201ENST00000408644 118 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 RNU2-20P-201ENST00000410425 191 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 RNA5SP508-201ENST00000411327 119 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AL135786.1-201ENST00000415892 214 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AC078809.1-201ENST00000427601 140 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AL353752.1-201ENST00000454946 260 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 snoU13.6-201ENST00000458785 104 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AL121594.1-201ENST00000475906 575 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AC104564.1-201ENST00000493028 407 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AC021146.2-201ENST00000504736 556 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 RNU4-77P-201ENST00000516692 156 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 RN7SKP295-201ENST00000517264 153 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AC007375.1-201ENST00000554513 578 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.3□□□□□ -2.04
UPF2Q9HAU5 SNORD58B-201ENST00000607313 66 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 MIR1244-1-201ENST00000612829 85 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 AC133104.2-201ENST00000615272 193 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 SCARNA4-201ENST00000629045 128 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 MIR1244-3-201ENST00000635744 85 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 MIR1244-2-201ENST00000636449 85 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 MIR1244-4-202ENST00000636813 85 ntBASIC2.3□□□□□ -2.04
UPF2Q9HAU5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UPF2Q9HAU5 AC233981.2-201ENST00000611524 1614 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.29□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.28-201ENST00000362554 111 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 RNA5SP125-201ENST00000364843 120 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 SNORA46.1-201ENST00000391069 153 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 RNU6-1245P-201ENST00000411130 106 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 EIF4EP4-201ENST00000424916 578 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.29□□□□□ -2.04
UPF2Q9HAU5 AL160004.2-201ENST00000432935 350 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.29□□□□□ -2.04
UPF2Q9HAU5 U8.22-201ENST00000459141 133 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 RPL36AP48-201ENST00000485521 314 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.29□□□□□ -2.04
UPF2Q9HAU5 AC012493.3-201ENST00000604494 112 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 AL355802.3-201ENST00000607571 545 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.29□□□□□ -2.04
UPF2Q9HAU5 AC002543.1-201ENST00000299783 1954 ntBASIC2.29□□□□□ -2.04
UPF2Q9HAU5 RNU4-15P-201ENST00000362613 141 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 RNU6-212P-201ENST00000362642 104 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.80-201ENST00000362996 102 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 SNORD114-19-201ENST00000363072 75 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 SNORA33.2-201ENST00000365413 134 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.405-201ENST00000383979 100 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.451-201ENST00000384200 100 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.485-201ENST00000384395 102 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 RNU1-57P-201ENST00000384491 166 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.524-201ENST00000384564 100 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.561-201ENST00000384694 100 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.577-201ENST00000384794 101 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 RNA5SP213-201ENST00000391031 106 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.645-201ENST00000391229 102 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AL023284.1-201ENST00000403956 276 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 RNU6-1156P-201ENST00000410365 100 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.28□□□□□ -2.04
UPF2Q9HAU5 GPM6BP3-201ENST00000442797 145 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AC124916.1-201ENST00000444020 547 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.28□□□□□ -2.04
UPF2Q9HAU5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AC087477.1-201ENST00000465747 340 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.28□□□□□ -2.04
UPF2Q9HAU5 HMGB1P35-201ENST00000503360 598 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AC016632.1-201ENST00000503994 196 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AC109329.1-201ENST00000518744 317 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AL590705.4-201ENST00000532209 134 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AC004584.2-201ENST00000570407 410 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 MIR3122-201ENST00000577243 73 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AC008749.1-201ENST00000597650 306 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 SNRPGP19-201ENST00000603826 189 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Z98751.3-201ENST00000604447 521 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.812-201ENST00000610788 101 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.784-201ENST00000613803 101 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AC040896.1-201ENST00000613819 479 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.787-201ENST00000616522 101 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.780-201ENST00000617336 101 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AL590808.1-201ENST00000618696 141 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Y_RNA.801-201ENST00000619005 101 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 SNORD98-201ENST00000636377 67 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 Z75746.1-201ENST00000440243 2080 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 AP000560.1-201ENST00000624150 1937 ntBASIC2.28□□□□□ -2.04
UPF2Q9HAU5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.27□□□□□ -2.05
UPF2Q9HAU5 RNU6-1032P-201ENST00000384100 107 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
UPF2Q9HAU5 RNA5SP201-201ENST00000410316 124 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC097463.2-201ENST00000421074 142 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AL590135.1-201ENST00000422215 156 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC019205.3-201ENST00000424573 156 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC096644.2-201ENST00000429278 159 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AL445646.1-201ENST00000431784 216 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms