Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 MIR4659A-201ENST00000580269 81 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 AC127459.3-201ENST00000624328 466 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 MAPK10-266ENST00000641066 6555 ntBASIC2.71□□□□□ -1.97
EBF3Q9H4W6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
EBF3Q9H4W6 AC091564.4-201ENST00000533934 2194 ntBASIC2.71□□□□□ -1.97
EBF3Q9H4W6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
EBF3Q9H4W6 RNU6-746P-201ENST00000384112 109 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 RNA5SP213-201ENST00000391031 106 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 RNA5SP252-201ENST00000391131 119 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 RNA5SP492-201ENST00000411330 114 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AC009963.1-201ENST00000417265 157 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AL714022.1-201ENST00000439897 151 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 RPL23AP58-201ENST00000440453 469 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AL031659.1-201ENST00000447075 539 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 RPL30P1-201ENST00000488676 339 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AC091874.1-201ENST00000511402 339 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AC107393.1-201ENST00000512403 346 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AC022868.1-201ENST00000517767 391 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 CR383656.8-201ENST00000549046 145 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AC090617.3-201ENST00000573670 475 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 MIR3910-1-201ENST00000580936 111 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.71□□□□□ -1.98
EBF3Q9H4W6 MIR3133-201ENST00000583157 78 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 U2.14-201ENST00000615943 113 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AL590808.1-201ENST00000618696 141 ntBASIC2.71□□□□□ -1.98
EBF3Q9H4W6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.7□□□□□ -1.98
EBF3Q9H4W6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.7□□□□□ -1.98
EBF3Q9H4W6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
EBF3Q9H4W6 Y_RNA.286-201ENST00000364813 102 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 SNORA67.4-201ENST00000384688 142 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
EBF3Q9H4W6 AL139095.1-201ENST00000404326 391 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.7□□□□□ -1.98
EBF3Q9H4W6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
EBF3Q9H4W6 AC124916.1-201ENST00000444020 547 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 snoU13.30-201ENST00000458951 104 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 Y_RNA.644-201ENST00000459006 113 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 SRIP1-201ENST00000489235 288 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 RPS29P20-201ENST00000489592 171 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 RPL23AP75-201ENST00000491601 451 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 AF186996.7-201ENST00000492781 209 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 Y_RNA.674-201ENST00000516362 113 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 SNORA9.3-201ENST00000516383 129 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 AP000867.2-201ENST00000532468 320 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 AC021739.1-201ENST00000559631 174 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 MIR3605-201ENST00000583214 100 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 MIR4635-201ENST00000583759 79 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 AC010620.2-201ENST00000600135 313 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 Y_RNA.772-201ENST00000606692 102 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.7□□□□□ -1.98
EBF3Q9H4W6 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 MIR6715A-201ENST00000615929 79 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 AC010297.1-201ENST00000623948 149 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 AC241585.2-209ENST00000638217 143 ntBASIC2.7□□□□□ -1.98
EBF3Q9H4W6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
EBF3Q9H4W6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
EBF3Q9H4W6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.7□□□□□ -1.98
EBF3Q9H4W6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
EBF3Q9H4W6 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 Y_RNA.83-201ENST00000363005 113 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 RNU6-799P-201ENST00000363567 107 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
EBF3Q9H4W6 DEFA7P-201ENST00000382676 285 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 CD24P4-201ENST00000382840 243 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 RNU6-1027P-201ENST00000383998 107 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 RNU6-926P-201ENST00000384075 107 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 RNU6-17P-201ENST00000384245 107 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 RNU6-18P-201ENST00000384527 107 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 RNU6-651P-201ENST00000411040 105 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.69□□□□□ -1.98
EBF3Q9H4W6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.69□□□□□ -1.98
EBF3Q9H4W6 AL138752.1-201ENST00000452964 351 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 AC010099.1-201ENST00000455434 375 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 snoU13.28-201ENST00000459235 104 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.69□□□□□ -1.98
EBF3Q9H4W6 AC074198.2-201ENST00000508153 258 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 SERF1AP1-201ENST00000514575 187 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 RNA5SP282-201ENST00000516355 108 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 Y_RNA.683-201ENST00000516508 93 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.69□□□□□ -1.98
EBF3Q9H4W6 RPL23AP88-201ENST00000605759 454 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 SCARNA4-201ENST00000629045 128 ntBASIC2.69□□□□□ -1.98
EBF3Q9H4W6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.69□□□□□ -1.98
EBF3Q9H4W6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
EBF3Q9H4W6 AC233981.2-201ENST00000611524 1614 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
EBF3Q9H4W6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
EBF3Q9H4W6 MIR411-201ENST00000362239 96 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 RNU6-545P-201ENST00000362681 104 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms