Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VPS16Q9H269 RNU6-222P-201ENST00000362438 107 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 Y_RNA.20-201ENST00000362479 113 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 RNU6-1285P-201ENST00000363480 105 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 Y_RNA.237-201ENST00000364439 102 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 U3.13-201ENST00000364804 214 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 RNY3P4-201ENST00000384428 101 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 RNU4-70P-201ENST00000384579 139 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
VPS16Q9H269 U6atac.2-201ENST00000408644 118 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 AC244670.1-201ENST00000436879 112 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 AL513124.1-201ENST00000450410 614 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.84□□□□□ -1.95
VPS16Q9H269 RPL30P1-201ENST00000488676 339 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 ANXA2P1-201ENST00000505539 926 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 AC091874.1-201ENST00000511402 339 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 Y_RNA.706-201ENST00000516933 99 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS16Q9H269 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS16Q9H269 MIR4300-201ENST00000581016 96 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 MIR3670-2-201ENST00000582974 65 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 MIR3616-201ENST00000584070 92 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 MIR3670-1-201ENST00000584160 65 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 MIR3670-3-201ENST00000584855 65 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 MIR3670-4-201ENST00000612260 65 ntBASIC2.84□□□□□ -1.95
VPS16Q9H269 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS16Q9H269 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS16Q9H269 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS16Q9H269 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS16Q9H269 AC092268.1-201ENST00000342691 405 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 Y_RNA.16-201ENST00000362421 102 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 RNU6-655P-201ENST00000362858 107 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 SNORD27-201ENST00000363981 72 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 RNU6-338P-201ENST00000383888 105 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 Y_RNA.416-201ENST00000384014 113 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 Y_RNA.478-201ENST00000384358 107 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VPS16Q9H269 EIF4EP4-201ENST00000424916 578 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 RNU7-175P-201ENST00000515915 61 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 RNA5SP282-201ENST00000516355 108 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 Y_RNA.713-201ENST00000517013 96 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 AC016256.1-201ENST00000547971 354 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS16Q9H269 AC080128.1-201ENST00000474389 1917 ntBASIC2.83□□□□□ -1.96
VPS16Q9H269 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
VPS16Q9H269 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS16Q9H269 MIR335-201ENST00000362173 94 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 RNU6-1301P-201ENST00000362724 104 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 Y_RNA.143-201ENST00000363520 106 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 RNU6-1210P-201ENST00000363775 107 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 RNU6-200P-201ENST00000364743 107 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 DEFA7P-201ENST00000382676 285 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 Y_RNA.439-201ENST00000384119 94 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 Y_RNA.515-201ENST00000384535 112 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 AL079342.1-201ENST00000401460 267 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 RNU2-20P-201ENST00000410425 191 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS16Q9H269 MTND2P29-201ENST00000438595 412 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 snoU13.30-201ENST00000458951 104 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 AC080013.2-201ENST00000460866 323 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 RPL23AP75-201ENST00000491601 451 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 AF186996.7-201ENST00000492781 209 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS16Q9H269 RNA5SP367-201ENST00000516557 118 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 RNU6-1012P-201ENST00000516606 109 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 DEFB108E-201ENST00000524692 240 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 AC093023.1-201ENST00000547375 507 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 AC090617.3-201ENST00000573670 475 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 MIR3199-1-201ENST00000582434 88 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 MIR3136-201ENST00000583498 78 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 AC005000.2-201ENST00000605468 310 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 AC069294.1-201ENST00000608397 350 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 AC011476.5-201ENST00000615594 130 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 MIR376A1-201ENST00000616574 68 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 SCARNA4-201ENST00000629045 128 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 AL450472.1-202ENST00000637286 180 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
VPS16Q9H269 AC233981.2-201ENST00000611524 1614 ntBASIC2.82□□□□□ -1.96
VPS16Q9H269 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS16Q9H269 AL391987.6-201ENST00000305671 199 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 RNU4-9P-201ENST00000364951 139 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 RNU6-17P-201ENST00000384245 107 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 Y_RNA.504-201ENST00000384481 104 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 RNU6-18P-201ENST00000384527 107 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 Y_RNA.541-201ENST00000384640 113 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 MIR218-1-201ENST00000384999 110 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 MRPL35P1-201ENST00000404272 572 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 RPL30P4-201ENST00000429309 333 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 GPM6BP3-201ENST00000442797 145 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 AL139109.1-201ENST00000455491 297 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 RN7SKP40-201ENST00000517211 242 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS16Q9H269 AC091144.1-201ENST00000519573 138 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 AC023824.2-201ENST00000566185 400 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 AC009779.6-201ENST00000603972 165 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 AC240442.1-201ENST00000616055 283 ntBASIC2.81□□□□□ -1.96
VPS16Q9H269 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms