Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MIR22-201ENST00000362190 85 ntBASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 Y_RNA.288-201ENST00000364854 92 ntBASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 Y_RNA.376-201ENST00000365638 108 ntBASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 RNU6-20P-201ENST00000384106 107 ntBASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 Y_RNA.462-201ENST00000384268 102 ntBASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 RNU6-1026P-201ENST00000384465 108 ntBASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 RPL21P3-201ENST00000395517 478 ntBASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 AC117440.1-201ENST00000474107 571 ntBASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 DEFB131C-201ENST00000528817 165 ntBASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 MIR4300-201ENST00000581016 96 ntBASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 AL356280.1-201ENST00000603614 379 ntBASIC3.34□□□□□ -1.87
CCDC113Q9H0I3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.34□□□□□ -1.88
CCDC113Q9H0I3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CCDC113Q9H0I3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 RNU6-961P-201ENST00000363893 105 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 RNU6-546P-201ENST00000383991 107 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 Y_RNA.415-201ENST00000384012 112 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 RNU6-1310P-201ENST00000384153 107 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 SNORA44-201ENST00000384584 132 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 MIR627-201ENST00000384979 97 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 SNORD115-46-201ENST00000390982 71 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 Y_RNA.602-201ENST00000410535 92 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 RNA5SP475-201ENST00000410568 110 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 AC005002.2-201ENST00000438228 269 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 RNU7-14P-201ENST00000459331 62 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 RN7SL75P-201ENST00000461926 281 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 AC098869.1-201ENST00000481627 292 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 RN7SL20P-201ENST00000488827 297 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 RNU6-1098P-201ENST00000516772 96 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 RNA5SP380-201ENST00000517190 98 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 AC136932.1-201ENST00000574771 208 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 AC005176.2-201ENST00000596933 147 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 AC006006.1-201ENST00000603082 144 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 AC011373.1-201ENST00000607270 237 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC113Q9H0I3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 SNORD113-8-201ENST00000363497 74 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 SNORA71.1-201ENST00000364523 117 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 SNORD63-201ENST00000384262 68 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 RNU6-220P-201ENST00000390919 107 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 MIR887-201ENST00000401258 79 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 RNU6-121P-201ENST00000410525 99 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 AL390729.2-201ENST00000416137 156 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 RPL21P38-201ENST00000418090 167 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 Z96811.1-201ENST00000445880 108 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 TRBVB-201ENST00000477100 408 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 RPL26P26-201ENST00000480251 434 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 RN7SL283P-201ENST00000489055 303 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 AC025465.3-201ENST00000510570 311 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 RNU6-965P-201ENST00000516721 96 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 RNU7-110P-201ENST00000516891 62 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 AC068205.3-201ENST00000636385 468 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 AC108206.1-201ENST00000570186 4159 ntBASIC3.32□□□□□ -1.88
CCDC113Q9H0I3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 RNU6-1305P-201ENST00000364353 104 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 RNU6-1180P-201ENST00000364935 107 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 RNU6-234P-201ENST00000365229 104 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 Y_RNA.396-201ENST00000383949 103 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 RNU6-505P-201ENST00000384427 107 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 RNU6-21P-201ENST00000384710 107 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 Y_RNA.618-201ENST00000410949 107 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 RNU2-32P-201ENST00000411193 191 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 AC004866.1-201ENST00000411748 78 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 AL445687.1-201ENST00000439946 251 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 UQCRHP3-201ENST00000451503 251 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 SEPT14P8-201ENST00000508026 178 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 AC007318.2-201ENST00000620999 243 ntBASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC113Q9H0I3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 Y_RNA.230-201ENST00000364348 109 ntBASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 SNORD87-201ENST00000364849 89 ntBASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 SNORA46-201ENST00000384762 135 ntBASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 Z82209.1-201ENST00000422141 2135 ntBASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 AC009969.1-201ENST00000438726 172 ntBASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 MIR4506-201ENST00000584693 77 ntBASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 AC093732.2-201ENST00000607950 274 ntBASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 AL449363.1-201ENST00000617815 186 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms