Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC005741.1-201ENST00000511094 432 ntBASIC2.13□□□□□ -2.07
RAD9AQ99638 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.13□□□□□ -2.07
RAD9AQ99638 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
RAD9AQ99638 PCGEM1.1-201ENST00000613431 131 ntBASIC2.13□□□□□ -2.07
RAD9AQ99638 AC025253.1-201ENST00000613623 543 ntBASIC2.13□□□□□ -2.07
RAD9AQ99638 AC005520.5-201ENST00000613926 164 ntBASIC2.13□□□□□ -2.07
RAD9AQ99638 MIR7111-201ENST00000619751 72 ntBASIC2.13□□□□□ -2.07
RAD9AQ99638 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.12□□□□□ -2.07
RAD9AQ99638 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
RAD9AQ99638 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 MIR208B-201ENST00000401172 77 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 MIR1294-201ENST00000408503 142 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 RNU2-48P-201ENST00000410694 191 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 RNU4-14P-201ENST00000410858 122 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 AL356379.1-201ENST00000414105 126 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 AC093019.1-201ENST00000443135 252 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.12□□□□□ -2.07
RAD9AQ99638 RPL23AP75-201ENST00000491601 451 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.12□□□□□ -2.07
RAD9AQ99638 Y_RNA.670-201ENST00000516255 105 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 Y_RNA.708-201ENST00000516950 96 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 AC134698.4-201ENST00000523451 826 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.12□□□□□ -2.07
RAD9AQ99638 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 AC009994.1-201ENST00000606889 253 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 AL132822.1-201ENST00000617063 513 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 SDR42E1P4-201ENST00000620894 481 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
RAD9AQ99638 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
RAD9AQ99638 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
RAD9AQ99638 U3.9-201ENST00000363823 204 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 Y_RNA.474-201ENST00000384341 102 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 Y_RNA.533-201ENST00000384596 114 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 EDDM3CP-201ENST00000415977 425 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.11□□□□□ -2.07
RAD9AQ99638 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 RNU6-965P-201ENST00000516721 96 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 RNU6-667P-201ENST00000517186 102 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.11□□□□□ -2.07
RAD9AQ99638 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.11□□□□□ -2.07
RAD9AQ99638 MIR5696-201ENST00000578474 85 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 MIR3683-201ENST00000580847 82 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 SNRPGP17-201ENST00000603780 214 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 AC009229.3-201ENST00000608056 282 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 PISRT1.1-201ENST00000616930 107 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 AL162373.1-201ENST00000620433 407 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.11□□□□□ -2.07
RAD9AQ99638 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.11□□□□□ -2.07
RAD9AQ99638 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
RAD9AQ99638 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.1□□□□□ -2.07
RAD9AQ99638 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
RAD9AQ99638 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
RAD9AQ99638 MIR337-201ENST00000362281 93 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 Y_RNA.2-201ENST00000362330 96 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 Y_RNA.70-201ENST00000362886 110 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 RNA5SP190-201ENST00000365222 118 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 SNORA51.11-201ENST00000384442 131 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 RNU6-1093P-201ENST00000391194 107 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 AL358453.1-201ENST00000422522 250 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 AC087477.1-201ENST00000465747 340 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 RPL7P42-201ENST00000481005 679 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 SNORA4.4-201ENST00000515921 135 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 EIF4A1P12-201ENST00000551910 141 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 MIR5089-201ENST00000580047 84 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 AC113139.1-201ENST00000605049 239 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 AP000654.2-201ENST00000605633 586 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 AL132765.2-201ENST00000610812 351 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 SCARNA4-201ENST00000629045 128 ntBASIC2.1□□□□□ -2.07
RAD9AQ99638 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RAD9AQ99638 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RAD9AQ99638 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RAD9AQ99638 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
RAD9AQ99638 Y_RNA.48-201ENST00000362710 103 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 RNU6-457P-201ENST00000363999 107 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 Y_RNA.263-201ENST00000364659 114 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 RNU4-9P-201ENST00000364951 139 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 RNU6-26P-201ENST00000383985 107 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 RNU6-370P-201ENST00000411008 104 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
RAD9AQ99638 BTF3P4-201ENST00000418852 495 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.09□□□□□ -2.07
RAD9AQ99638 RNU6-277P-201ENST00000516272 106 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 SNORA25.15-201ENST00000516487 89 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 RNA5SP137-201ENST00000516833 135 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.09□□□□□ -2.07
RAD9AQ99638 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.09□□□□□ -2.07
RAD9AQ99638 AC026271.5-201ENST00000577873 130 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 MIR5002-201ENST00000584713 97 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 RPL17P51-201ENST00000605218 238 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 AC137590.2-201ENST00000619709 240 ntBASIC2.09□□□□□ -2.07
RAD9AQ99638 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RAD9AQ99638 KPNA2P1-201ENST00000458289 1591 ntBASIC2.09□□□□□ -2.08
RAD9AQ99638 AC009487.4-201ENST00000624969 3585 ntBASIC2.09□□□□□ -2.08
RAD9AQ99638 ZNF299P-201ENST00000406845 1804 ntBASIC2.08□□□□□ -2.08
RAD9AQ99638 Y_RNA.404-201ENST00000383978 102 ntBASIC2.08□□□□□ -2.08
RAD9AQ99638 SNORA75.4-201ENST00000391278 119 ntBASIC2.08□□□□□ -2.08
RAD9AQ99638 RPS26P42-201ENST00000413485 326 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms