Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AC092436.3-201ENST00000511788 257 ntBASIC1.46□□□□□ -2.18
SCN2AQ99250 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.46□□□□□ -2.18
SCN2AQ99250 BX248123.2-201ENST00000606318 124 ntBASIC1.46□□□□□ -2.18
SCN2AQ99250 MIR3688-2-201ENST00000636963 87 ntBASIC1.46□□□□□ -2.18
SCN2AQ99250 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
SCN2AQ99250 RNU1-23P-201ENST00000363361 144 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 RNU6-593P-201ENST00000364716 112 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 Y_RNA.508-201ENST00000384502 114 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 RNA5SP465-201ENST00000391195 109 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 MIR1283-2-201ENST00000408621 87 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 RPL31P63-201ENST00000422565 375 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN2AQ99250 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN2AQ99250 AC055731.1-201ENST00000474387 401 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN2AQ99250 RNU6-612P-201ENST00000516909 102 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 RNU6-273P-201ENST00000516937 96 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 RNU6-1314P-201ENST00000517139 104 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN2AQ99250 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN2AQ99250 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN2AQ99250 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN2AQ99250 U6atac.1-201ENST00000616025 117 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 Y_RNA.301-201ENST00000364990 103 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 Y_RNA.504-201ENST00000384481 104 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 SNORD115-47-201ENST00000391226 86 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 RPS26P42-201ENST00000413485 326 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN2AQ99250 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN2AQ99250 AC079354.2-201ENST00000453523 154 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 AC114982.1-201ENST00000469402 321 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 ACA59.1-201ENST00000515966 143 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 RNU6-1198P-201ENST00000516904 67 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN2AQ99250 MIR3942-201ENST00000585264 109 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN2AQ99250 AL645939.4-201ENST00000604495 135 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 AC002553.4-201ENST00000616896 331 ntBASIC1.45□□□□□ -2.18
SCN2AQ99250 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SCN2AQ99250 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.44□□□□□ -2.18
SCN2AQ99250 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SCN2AQ99250 Y_RNA.132-201ENST00000363421 102 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 Y_RNA.339-201ENST00000365325 102 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 Y_RNA.533-201ENST00000384596 114 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 MIR218-1-201ENST00000384999 110 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 RNU6-1156P-201ENST00000410365 100 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 Y_RNA.599-201ENST00000410489 109 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 RNU2-32P-201ENST00000411193 191 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 MTATP6P13-201ENST00000438531 667 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 NFU1P2-201ENST00000448700 469 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 PCMTD1P1-201ENST00000455560 355 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 MTND1P11-201ENST00000456661 876 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 RPL31P58-201ENST00000469001 379 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN2AQ99250 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN2AQ99250 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN2AQ99250 RNA5SP54-201ENST00000516951 92 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 AC005668.1-201ENST00000571142 476 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 AL109918.3-201ENST00000603072 338 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SCN2AQ99250 WWP1P1-201ENST00000466609 2769 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
SCN2AQ99250 MTND4P5-201ENST00000435821 1374 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 RNU5B-2P-201ENST00000363036 113 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 SNORD114-6-201ENST00000364393 72 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 RNA5SP363-201ENST00000365072 115 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 RNU6-1013P-201ENST00000384180 107 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 Y_RNA.573-201ENST00000384763 105 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 FGF7P8-201ENST00000402994 292 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN2AQ99250 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.44□□□□□ -2.18
SCN2AQ99250 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN2AQ99250 AC096745.1-201ENST00000509945 370 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 AP000763.2-201ENST00000540641 163 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 MIR3198-2-201ENST00000577868 80 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 AC080078.2-201ENST00000603766 501 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 AL121757.2-201ENST00000611223 313 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 TPTEP1-208ENST00000636884 213 ntBASIC1.44□□□□□ -2.18
SCN2AQ99250 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 SNORA7.1-201ENST00000363750 139 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 RNU1-42P-201ENST00000364033 160 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 Y_RNA.390-201ENST00000383932 102 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 MIR10B-201ENST00000385011 110 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 MIR1283-1-201ENST00000408494 87 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.43□□□□□ -2.18
SCN2AQ99250 AL590135.1-201ENST00000422215 156 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 AC019205.3-201ENST00000424573 156 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 MTND3P23-201ENST00000431980 347 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 MTCO3P29-201ENST00000432119 779 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 AC016700.2-201ENST00000446011 156 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 RPL17P19-201ENST00000489069 552 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 RPL23AP75-201ENST00000491601 451 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 AC015911.1-201ENST00000495111 156 ntBASIC1.43□□□□□ -2.18
SCN2AQ99250 EIF4A1P12-201ENST00000551910 141 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms