Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-78P-201ENST00000362897 107 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 RNU6-777P-201ENST00000364265 104 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 RNU6-384P-201ENST00000364900 104 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 RNU6-302P-201ENST00000365249 107 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 SNORA2.2-201ENST00000365473 135 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 AC083799.1-201ENST00000366451 910 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 MIR520F-201ENST00000384824 87 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 RNU6-440P-201ENST00000390882 105 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 RNA5SP467-201ENST00000391274 118 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 RNA5SP201-201ENST00000410316 124 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 PDCL2P1-201ENST00000419302 352 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 HMGN2P34-201ENST00000437647 269 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.24□□□□□ -2.45
IFT140Q96RY7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.24□□□□□ -2.45
IFT140Q96RY7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.24□□□□□ -2.45
IFT140Q96RY7 SNORA25.12-201ENST00000516202 82 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 RNU6-917P-201ENST00000516294 104 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 MIR4290-201ENST00000583807 95 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 RPL17P51-201ENST00000605218 238 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.24□□□□□ -2.45
IFT140Q96RY7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.24□□□□□ -2.45
IFT140Q96RY7 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.24□□□□□ -2.45
IFT140Q96RY7 AC006927.4-201ENST00000639187 543 ntBASIC-0.24□□□□□ -2.45
IFT140Q96RY7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
IFT140Q96RY7 RNU6-545P-201ENST00000362681 104 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 SNORA42.1-201ENST00000363515 137 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
IFT140Q96RY7 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 HMGN2P22-201ENST00000427588 175 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 RNU2-34P-201ENST00000516534 121 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.25□□□□□ -2.45
IFT140Q96RY7 AC093027.1-201ENST00000546698 429 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.25□□□□□ -2.45
IFT140Q96RY7 AL158211.1-201ENST00000566763 763 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 TMF1P1-201ENST00000576058 373 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.25□□□□□ -2.45
IFT140Q96RY7 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.25□□□□□ -2.45
IFT140Q96RY7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
IFT140Q96RY7 RNU1-76P-201ENST00000362903 159 ntBASIC-0.26□□□□□ -2.45
IFT140Q96RY7 RNU6-946P-201ENST00000383878 107 ntBASIC-0.26□□□□□ -2.45
IFT140Q96RY7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.26□□□□□ -2.45
IFT140Q96RY7 STAG3L5P-204ENST00000443759 179 ntBASIC-0.26□□□□□ -2.45
IFT140Q96RY7 AC010469.2-201ENST00000496412 480 ntBASIC-0.26□□□□□ -2.45
IFT140Q96RY7 AC004223.2-201ENST00000590309 544 ntBASIC-0.26□□□□□ -2.45
IFT140Q96RY7 OR4H6P-202ENST00000603819 340 ntBASIC-0.26□□□□□ -2.45
IFT140Q96RY7 AP000484.1-201ENST00000620067 1252 ntBASIC-0.26□□□□□ -2.45
IFT140Q96RY7 AL390237.1-201ENST00000404226 1415 ntBASIC-0.26□□□□□ -2.45
IFT140Q96RY7 RNY4P16-201ENST00000364768 94 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 MIR518A1-201ENST00000385068 85 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 RNA5SP496-201ENST00000391240 109 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 AL953862.1-201ENST00000423016 168 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 AC007283.2-201ENST00000424739 197 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 USP9YP28-201ENST00000435142 589 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 AC244670.1-201ENST00000436879 112 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.27□□□□□ -2.45
IFT140Q96RY7 RBBP4P6-201ENST00000508098 202 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 AC022868.1-201ENST00000517767 391 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.27□□□□□ -2.45
IFT140Q96RY7 MIR3912-201ENST00000577566 105 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 MIR3146-201ENST00000580367 79 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 AC022217.4-201ENST00000604389 163 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 AC064872.1-201ENST00000604823 1072 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.27□□□□□ -2.45
IFT140Q96RY7 AC099785.1-201ENST00000605697 437 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 AL096861.1-201ENST00000610899 123 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 SEPT14P17-201ENST00000617978 177 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 AC103706.2-201ENST00000638080 240 ntBASIC-0.27□□□□□ -2.45
IFT140Q96RY7 MIR320C1-201ENST00000408566 88 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 RNU6-994P-201ENST00000410507 111 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.28□□□□□ -2.45
IFT140Q96RY7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.28□□□□□ -2.45
IFT140Q96RY7 RPS29P8-201ENST00000445109 171 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.28□□□□□ -2.45
IFT140Q96RY7 snoU13.25-201ENST00000458945 104 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 AC007547.1-201ENST00000462177 490 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 AP002453.2-201ENST00000533503 320 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 AC090517.1-201ENST00000569307 266 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 MIR548AC-201ENST00000585049 88 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 AC008752.3-201ENST00000588113 712 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 AC104408.1-201ENST00000605241 170 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 RNU6-94P-201ENST00000607728 107 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 AC004832.4-201ENST00000608952 331 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.28□□□□□ -2.45
IFT140Q96RY7 AC078938.1-201ENST00000620993 318 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 MIR6079-201ENST00000635807 62 ntBASIC-0.28□□□□□ -2.45
IFT140Q96RY7 RNU6-378P-201ENST00000384324 107 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 MIR1253-201ENST00000408273 105 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.29□□□□□ -2.46
IFT140Q96RY7 MTCO3P10-201ENST00000455912 772 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 MTCO2P18-201ENST00000457151 658 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms