Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNU6-545P-201ENST00000362681 104 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 Y_RNA.358-201ENST00000365491 99 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 Y_RNA.557-201ENST00000384680 107 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 AC096638.1-201ENST00000444678 216 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 IFNA11P-201ENST00000446352 526 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 AC016925.1-201ENST00000458303 298 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 AC027575.1-201ENST00000481064 460 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC138Q96M89 RNU6-699P-201ENST00000517081 110 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC138Q96M89 AC144568.1-201ENST00000520139 137 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC138Q96M89 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC138Q96M89 MIR4635-201ENST00000583759 79 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 AC013412.1-201ENST00000610687 192 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 AL359314.1-201ENST00000616913 261 ntBASIC2.59□□□□□ -1.99
CCDC138Q96M89 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC138Q96M89 MTND4P29-201ENST00000503122 1372 ntBASIC2.59□□□□□ -2
CCDC138Q96M89 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC138Q96M89 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
CCDC138Q96M89 Y_RNA.132-201ENST00000363421 102 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 RNU6-281P-201ENST00000384212 103 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 Y_RNA.460-201ENST00000384255 102 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 Y_RNA.463-201ENST00000384271 102 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 Y_RNA.535-201ENST00000384612 99 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 SNORA69.1-201ENST00000390904 137 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 MIR1283-1-201ENST00000408494 87 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.58□□□□□ -2
CCDC138Q96M89 MTND4P28-201ENST00000426217 387 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 EIF1P2-201ENST00000428233 350 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.58□□□□□ -2
CCDC138Q96M89 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.58□□□□□ -2
CCDC138Q96M89 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.58□□□□□ -2
CCDC138Q96M89 AC105758.1-201ENST00000506038 399 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 RNA5SP356-201ENST00000515972 94 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 SNORA31.11-201ENST00000516528 139 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 AC091144.1-201ENST00000519573 138 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.58□□□□□ -2
CCDC138Q96M89 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.58□□□□□ -2
CCDC138Q96M89 MIR4753-201ENST00000585119 83 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.58□□□□□ -2
CCDC138Q96M89 AC090574.1-201ENST00000623186 233 ntBASIC2.58□□□□□ -2
CCDC138Q96M89 SNORA5B-201ENST00000363786 132 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 Y_RNA.179-201ENST00000363844 90 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 Y_RNA.314-201ENST00000365114 102 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 Y_RNA.419-201ENST00000384041 102 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 Y_RNA.428-201ENST00000384078 102 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 RNU6-793P-201ENST00000384233 104 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 RNA5SP213-201ENST00000391031 106 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.57□□□□□ -2
CCDC138Q96M89 AC114482.1-201ENST00000418010 247 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.57□□□□□ -2
CCDC138Q96M89 AC007395.1-201ENST00000451333 677 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.57□□□□□ -2
CCDC138Q96M89 SNORD109B-201ENST00000458961 67 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 SNORD109A-201ENST00000459128 67 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.57□□□□□ -2
CCDC138Q96M89 HMGB3P3-201ENST00000510526 400 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 RNU6-976P-201ENST00000516086 111 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 RNU7-193P-201ENST00000516723 65 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 MIR2355-201ENST00000517199 87 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.57□□□□□ -2
CCDC138Q96M89 AC087441.2-201ENST00000529141 262 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 MYL12BP1-201ENST00000569826 507 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 MIR4319-201ENST00000577285 85 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 SNORD11B-201ENST00000607707 90 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 AC010999.1-201ENST00000611856 324 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.57□□□□□ -2
CCDC138Q96M89 AC243829.7-201ENST00000633081 225 ntBASIC2.57□□□□□ -2
CCDC138Q96M89 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CCDC138Q96M89 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC138Q96M89 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.57□□□□□ -2
CCDC138Q96M89 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CCDC138Q96M89 RNU6-1115P-201ENST00000362490 106 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 SNORD115-3-201ENST00000363100 82 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 Y_RNA.197-201ENST00000364004 102 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 MIR586-201ENST00000385035 97 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 HMGN2P39-201ENST00000398005 273 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 OOSP1P1-201ENST00000423265 274 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.56□□□□□ -2
CCDC138Q96M89 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.56□□□□□ -2
CCDC138Q96M89 HMGN1P13-201ENST00000505795 138 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 AC096725.1-201ENST00000514266 313 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 SNORD116.3-201ENST00000517176 78 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 AC093023.1-201ENST00000547375 507 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 AC009127.3-201ENST00000570531 403 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.56□□□□□ -2
CCDC138Q96M89 AC087588.2-201ENST00000617667 426 ntBASIC2.56□□□□□ -2
CCDC138Q96M89 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC138Q96M89 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC138Q96M89 RNU6-1305P-201ENST00000364353 104 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 RNA5SP126-201ENST00000365092 109 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 RNU6-160P-201ENST00000384591 107 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 AL033519.2-201ENST00000403958 392 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 Y_RNA.605-201ENST00000410577 105 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 RPS20P15-201ENST00000412792 311 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.55□□□□□ -2
CCDC138Q96M89 MRPS18CP6-201ENST00000423587 223 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms