Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 U2.5-201ENST00000619465 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 U2.10-201ENST00000620268 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
VPS33AQ96AX1 AL356292.1-201ENST00000283110 373 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 RNU6-112P-201ENST00000363599 104 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 RNU6-418P-201ENST00000384035 107 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 MIR32-201ENST00000384965 70 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 RNU2-20P-201ENST00000410425 191 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 MTATP6P13-201ENST00000438531 667 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
VPS33AQ96AX1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.86□□□□□ -2.11
VPS33AQ96AX1 RNU6-273P-201ENST00000516937 96 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 SNORA31.17-201ENST00000516953 127 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 RNU1-54P-201ENST00000517181 120 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS33AQ96AX1 MIR3122-201ENST00000577243 73 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 SNORA59B-202ENST00000578183 701 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.86□□□□□ -2.11
VPS33AQ96AX1 7SK.7-201ENST00000603504 247 ntBASIC1.86□□□□□ -2.11
VPS33AQ96AX1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS33AQ96AX1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS33AQ96AX1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS33AQ96AX1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
VPS33AQ96AX1 Y_RNA.301-201ENST00000364990 103 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 Y_RNA.319-201ENST00000365138 92 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 RNU6-306P-201ENST00000384617 107 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 MIR549A-201ENST00000385268 96 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 RNU6-510P-201ENST00000391239 108 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 RNU6-192P-201ENST00000391253 100 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 RNU6-174P-201ENST00000410406 106 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS33AQ96AX1 AC243428.1-201ENST00000421099 264 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 Z82188.1-201ENST00000436709 154 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 HMGB3P17-201ENST00000504195 649 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VPS33AQ96AX1 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS33AQ96AX1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS33AQ96AX1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS33AQ96AX1 AC007014.2-201ENST00000615581 479 ntBASIC1.85□□□□□ -2.11
VPS33AQ96AX1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS33AQ96AX1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
VPS33AQ96AX1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.84□□□□□ -2.11
VPS33AQ96AX1 SNORA67.2-201ENST00000384300 149 ntBASIC1.84□□□□□ -2.11
VPS33AQ96AX1 Y_RNA.490-201ENST00000384413 102 ntBASIC1.84□□□□□ -2.11
VPS33AQ96AX1 MIR487A-201ENST00000385009 80 ntBASIC1.84□□□□□ -2.11
VPS33AQ96AX1 AC099677.2-201ENST00000436385 175 ntBASIC1.84□□□□□ -2.11
VPS33AQ96AX1 HMGB1P18-201ENST00000438801 619 ntBASIC1.84□□□□□ -2.11
VPS33AQ96AX1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS33AQ96AX1 AC011406.1-201ENST00000512440 370 ntBASIC1.84□□□□□ -2.11
VPS33AQ96AX1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS33AQ96AX1 RNU4-49P-201ENST00000516080 140 ntBASIC1.84□□□□□ -2.11
VPS33AQ96AX1 RNU6-58P-201ENST00000517143 103 ntBASIC1.84□□□□□ -2.11
VPS33AQ96AX1 AF235103.2-201ENST00000525753 346 ntBASIC1.84□□□□□ -2.11
VPS33AQ96AX1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS33AQ96AX1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS33AQ96AX1 SNORD11B-201ENST00000607707 90 ntBASIC1.84□□□□□ -2.11
VPS33AQ96AX1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
VPS33AQ96AX1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
VPS33AQ96AX1 RNU4-82P-201ENST00000362443 140 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 RNU6-1305P-201ENST00000364353 104 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 RNU6-17P-201ENST00000384245 107 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 RNU6-18P-201ENST00000384527 107 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 RNU6-296P-201ENST00000384608 107 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AL117342.1-201ENST00000404861 406 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 RPL21P111-201ENST00000418453 477 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AC060773.1-201ENST00000421698 310 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 CST2P1-201ENST00000425770 87 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS33AQ96AX1 MTND1P4-201ENST00000435196 415 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.83□□□□□ -2.12
VPS33AQ96AX1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS33AQ96AX1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS33AQ96AX1 RN7SKP210-201ENST00000459176 261 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS33AQ96AX1 RNU6-1041P-201ENST00000516254 102 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AC027288.2-201ENST00000553028 243 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 MIR4273-201ENST00000582824 84 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AC080078.2-201ENST00000603766 501 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AC009248.2-201ENST00000619826 254 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AL078596.1-201ENST00000624856 447 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 AC027514.1-201ENST00000588561 1603 ntBASIC1.83□□□□□ -2.12
VPS33AQ96AX1 ZNF299P-201ENST00000406845 1804 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 RNU1-62P-201ENST00000362599 164 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 RNU6-862P-201ENST00000362804 105 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 RNU1-96P-201ENST00000364163 162 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 MIR520A-201ENST00000384862 85 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 EBAG9P1-201ENST00000418955 543 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 AL356320.1-201ENST00000429616 163 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 AL445646.1-201ENST00000431784 216 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 AC069257.2-201ENST00000441819 155 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS33AQ96AX1 FGF7P6-202ENST00000451282 293 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms