Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RPL23AP3-201ENST00000453844 468 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 RPL23AP70-201ENST00000483361 460 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 SNORD116-28-201ENST00000516123 91 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 AP002392.1-201ENST00000537692 208 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 EIF4A1P12-201ENST00000551910 141 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.52□□□□□ -1.85
BRF1Q92994 MIR3944-201ENST00000581277 108 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.52□□□□□ -1.85
BRF1Q92994 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.52□□□□□ -1.85
BRF1Q92994 AC004467.1-201ENST00000615678 330 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRF1Q92994 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
BRF1Q92994 RNU4-15P-201ENST00000362613 141 ntBASIC3.51□□□□□ -1.85
BRF1Q92994 Y_RNA.101-201ENST00000363154 102 ntBASIC3.51□□□□□ -1.85
BRF1Q92994 RNU1-105P-201ENST00000363470 161 ntBASIC3.51□□□□□ -1.85
BRF1Q92994 RNU6-651P-201ENST00000411040 105 ntBASIC3.51□□□□□ -1.85
BRF1Q92994 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.51□□□□□ -1.85
BRF1Q92994 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.51□□□□□ -1.85
BRF1Q92994 RPS3P1-201ENST00000456781 192 ntBASIC3.51□□□□□ -1.85
BRF1Q92994 Y_RNA.638-201ENST00000459374 113 ntBASIC3.51□□□□□ -1.85
BRF1Q92994 AC024405.2-202ENST00000532731 184 ntBASIC3.51□□□□□ -1.85
BRF1Q92994 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.51□□□□□ -1.85
BRF1Q92994 AC107294.3-201ENST00000609211 526 ntBASIC3.51□□□□□ -1.85
BRF1Q92994 MIR3651-201ENST00000630427 90 ntBASIC3.51□□□□□ -1.85
BRF1Q92994 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BRF1Q92994 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.51□□□□□ -1.85
BRF1Q92994 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
BRF1Q92994 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.51□□□□□ -1.85
BRF1Q92994 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
BRF1Q92994 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.51□□□□□ -1.85
BRF1Q92994 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
BRF1Q92994 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRF1Q92994 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRF1Q92994 RNU6-1289P-201ENST00000384431 106 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 MIR186-201ENST00000384988 86 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 RNU6-1199P-201ENST00000411249 104 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 AL392103.1-201ENST00000447000 198 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 AL121594.1-201ENST00000475906 575 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 AC107393.1-201ENST00000512403 346 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 Y_RNA.679-201ENST00000516416 91 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 RNU6-966P-201ENST00000516479 104 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 RNU6-1212P-201ENST00000517023 104 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.5□□□□□ -1.85
BRF1Q92994 AC079598.5-201ENST00000547460 117 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.5□□□□□ -1.85
BRF1Q92994 RPL21P9-201ENST00000556149 474 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.5□□□□□ -1.85
BRF1Q92994 AC096577.2-201ENST00000611455 153 ntBASIC3.5□□□□□ -1.85
BRF1Q92994 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.5□□□□□ -1.85
BRF1Q92994 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
BRF1Q92994 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.49□□□□□ -1.85
BRF1Q92994 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.49□□□□□ -1.85
BRF1Q92994 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BRF1Q92994 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.49□□□□□ -1.85
BRF1Q92994 MIR208A-201ENST00000362287 71 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 RNU6-545P-201ENST00000362681 104 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 RNU6-1210P-201ENST00000363775 107 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 U3.9-201ENST00000363823 204 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 SNORD46.1-201ENST00000364139 104 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 Y_RNA.217-201ENST00000364214 105 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 SNORA71.1-201ENST00000364523 117 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 SNORA14A-201ENST00000364773 135 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 RNU1-57P-201ENST00000384491 166 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 RNU2-54P-201ENST00000410299 190 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.49□□□□□ -1.85
BRF1Q92994 AL031183.1-201ENST00000457667 207 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 Y_RNA.641-201ENST00000459414 105 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 AP001324.2-201ENST00000461163 319 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 RNU6-344P-201ENST00000516635 111 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 RNA5SP380-201ENST00000517190 98 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.49□□□□□ -1.85
BRF1Q92994 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.49□□□□□ -1.85
BRF1Q92994 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.49□□□□□ -1.85
BRF1Q92994 AL512605.2-201ENST00000592972 256 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 TCL6_2.1-201ENST00000615162 119 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 AC073349.3-201ENST00000617616 186 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 AC091932.3-201ENST00000624223 323 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 MIR3674-201ENST00000636576 68 ntBASIC3.49□□□□□ -1.85
BRF1Q92994 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.49□□□□□ -1.85
BRF1Q92994 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.48□□□□□ -1.85
BRF1Q92994 RNU6-655P-201ENST00000362858 107 ntBASIC3.48□□□□□ -1.85
BRF1Q92994 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.48□□□□□ -1.85
BRF1Q92994 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.48□□□□□ -1.85
BRF1Q92994 AP004217.1-201ENST00000480579 346 ntBASIC3.48□□□□□ -1.85
BRF1Q92994 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.48□□□□□ -1.85
BRF1Q92994 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.48□□□□□ -1.85
BRF1Q92994 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.48□□□□□ -1.85
BRF1Q92994 AP002001.1-203ENST00000534002 267 ntBASIC3.48□□□□□ -1.85
BRF1Q92994 AC027176.1-201ENST00000560204 514 ntBASIC3.48□□□□□ -1.85
BRF1Q92994 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.48□□□□□ -1.85
BRF1Q92994 AC072026.1-201ENST00000605023 201 ntBASIC3.48□□□□□ -1.85
BRF1Q92994 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.48□□□□□ -1.85
BRF1Q92994 AC005562.2-201ENST00000618264 111 ntBASIC3.48□□□□□ -1.85
BRF1Q92994 MIR8057-201ENST00000620957 69 ntBASIC3.48□□□□□ -1.85
BRF1Q92994 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.48□□□□□ -1.85
BRF1Q92994 AC026241.1-201ENST00000517873 2142 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 AC092593.1-201ENST00000515413 1815 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.47□□□□□ -1.85
BRF1Q92994 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms