Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.83□□□□□ -2.28
CLHC1Q8NHS4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.83□□□□□ -2.28
CLHC1Q8NHS4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.83□□□□□ -2.28
CLHC1Q8NHS4 RNU6-165P-201ENST00000517170 99 ntBASIC0.83□□□□□ -2.28
CLHC1Q8NHS4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.83□□□□□ -2.28
CLHC1Q8NHS4 MIR4753-201ENST00000585119 83 ntBASIC0.83□□□□□ -2.28
CLHC1Q8NHS4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.83□□□□□ -2.28
CLHC1Q8NHS4 AC009161.2-201ENST00000624626 138 ntBASIC0.83□□□□□ -2.28
CLHC1Q8NHS4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.83□□□□□ -2.28
CLHC1Q8NHS4 Y_RNA.118-201ENST00000363300 101 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 SNORA33-201ENST00000363664 130 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 RNU6-1080P-201ENST00000383982 107 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 RNU6-42P-201ENST00000384165 107 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 MIR19B1-201ENST00000384829 87 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 SNORA40.3-201ENST00000390964 122 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 CDK8P2-201ENST00000415020 547 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 AC010099.3-201ENST00000423896 409 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 snoU13.18-201ENST00000459483 104 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 RPL39P38-201ENST00000467018 153 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 HMGN1P12-201ENST00000499125 195 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 RNU6-1146P-201ENST00000516282 102 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 AL137161.1-201ENST00000532231 390 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 AC009094.1-201ENST00000564443 426 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 FAM71BP1-201ENST00000604431 523 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 Z84480.1-201ENST00000605131 311 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 AC104458.1-201ENST00000608243 463 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 TCL6_2.1-201ENST00000615162 119 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 MIR6734-201ENST00000621166 68 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 AC079248.2-201ENST00000623779 326 ntBASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CLHC1Q8NHS4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 RNU5B-2P-201ENST00000363036 113 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 RNU6-553P-201ENST00000364047 96 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 SNORD114-22-201ENST00000365423 72 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 RNU6-297P-201ENST00000384636 107 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 RNU6-248P-201ENST00000410720 107 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 CYCSP46-201ENST00000423569 204 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 AC105417.1-201ENST00000514691 285 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 RN7SKP265-201ENST00000516448 223 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 RNU6-113P-201ENST00000516653 101 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 AC008088.1-201ENST00000580993 280 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 BNIP3P39-201ENST00000601077 554 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 RNU6-85P-201ENST00000605989 107 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
CLHC1Q8NHS4 Y_RNA.287-201ENST00000364853 94 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 RNU6-282P-201ENST00000365357 103 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 RNU6-950P-201ENST00000384651 107 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 AC133104.1-201ENST00000429100 218 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 NFU1P2-201ENST00000448700 469 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 AL356010.1-201ENST00000456364 102 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 RNU7-34P-201ENST00000459394 64 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 RPS29P27-201ENST00000463711 170 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 TPRKBP2-201ENST00000565969 475 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 AC068790.2-201ENST00000602601 557 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 AC021506.2-201ENST00000612354 169 ntBASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.8□□□□□ -2.28
CLHC1Q8NHS4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AC009541.1-201ENST00000438279 2662 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 Y_RNA.560-201ENST00000384689 102 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AC004386.2-201ENST00000441858 148 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AC009237.7-201ENST00000447357 229 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AC016717.1-201ENST00000448918 286 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 snoU13.6-201ENST00000458785 104 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AP002963.1-201ENST00000530590 184 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AC011604.1-201ENST00000545978 196 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 FAM106DP-201ENST00000586416 501 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AC016727.2-201ENST00000603988 621 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 AC068787.1-201ENST00000623908 691 ntBASIC0.79□□□□□ -2.28
CLHC1Q8NHS4 RNU4-21P-201ENST00000362802 126 ntBASIC0.78□□□□□ -2.28
CLHC1Q8NHS4 RNU6-227P-201ENST00000362865 103 ntBASIC0.78□□□□□ -2.28
CLHC1Q8NHS4 RNU6-181P-201ENST00000363225 107 ntBASIC0.78□□□□□ -2.28
CLHC1Q8NHS4 Y_RNA.796-201ENST00000364268 102 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms