Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 Y_RNA.100-201ENST00000363141 102 ntBASIC1.89□□□□□ -2.11
CCDC89Q8N998 SNORA63D-201ENST00000364359 132 ntBASIC1.89□□□□□ -2.11
CCDC89Q8N998 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC89Q8N998 AC016717.1-201ENST00000448918 286 ntBASIC1.89□□□□□ -2.11
CCDC89Q8N998 HSPE1P24-201ENST00000450782 238 ntBASIC1.89□□□□□ -2.11
CCDC89Q8N998 RNA5SP437-201ENST00000517249 129 ntBASIC1.89□□□□□ -2.11
CCDC89Q8N998 POLR3GP2-201ENST00000588366 668 ntBASIC1.89□□□□□ -2.11
CCDC89Q8N998 AL138726.1-201ENST00000614873 333 ntBASIC1.89□□□□□ -2.11
CCDC89Q8N998 AC015540.1-201ENST00000615828 501 ntBASIC1.89□□□□□ -2.11
CCDC89Q8N998 MIR338-201ENST00000636369 67 ntBASIC1.89□□□□□ -2.11
CCDC89Q8N998 ZNF204P-201ENST00000416749 2397 ntBASIC1.89□□□□□ -2.11
CCDC89Q8N998 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC89Q8N998 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CCDC89Q8N998 SNORD50.1-201ENST00000362987 71 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 SNORA72.2-201ENST00000365028 127 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 RNU6-95P-201ENST00000384697 107 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 MIR181A1-201ENST00000385026 110 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 RNU6-332P-201ENST00000391193 108 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 AC004866.1-201ENST00000411748 78 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC89Q8N998 DAP3P1-201ENST00000441522 278 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC89Q8N998 MTCO2P30-201ENST00000503662 364 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 RNU6-970P-201ENST00000516312 107 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 RNU6-344P-201ENST00000516635 111 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 AC109635.3-201ENST00000529536 185 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 MIR3618-201ENST00000580330 88 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 AC023043.2-201ENST00000589678 1026 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 WWP1P1-201ENST00000466609 2769 ntBASIC1.88□□□□□ -2.11
CCDC89Q8N998 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC89Q8N998 RNU4-9P-201ENST00000364951 139 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC89Q8N998 MIR515-2-201ENST00000384883 83 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 MIR515-1-201ENST00000384884 83 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 RNU6-373P-201ENST00000411247 98 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 RN7SKP192-201ENST00000411291 327 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 AL358453.1-201ENST00000422522 250 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 AC079354.2-201ENST00000453523 154 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 MTND1P11-201ENST00000456661 876 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 RNU7-57P-201ENST00000459540 60 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 RNU6-256P-201ENST00000516747 97 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC89Q8N998 AF250324.2-201ENST00000608299 610 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 AC006504.8-201ENST00000621046 635 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 AL078596.1-201ENST00000624856 447 ntBASIC1.87□□□□□ -2.11
CCDC89Q8N998 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC89Q8N998 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC89Q8N998 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC89Q8N998 Y_RNA.41-201ENST00000362646 102 ntBASIC1.86□□□□□ -2.11
CCDC89Q8N998 RNU6-245P-201ENST00000384020 107 ntBASIC1.86□□□□□ -2.11
CCDC89Q8N998 U8.10-201ENST00000384260 133 ntBASIC1.86□□□□□ -2.11
CCDC89Q8N998 AC007098.1-201ENST00000420122 367 ntBASIC1.86□□□□□ -2.11
CCDC89Q8N998 DLGAP5P1-201ENST00000430307 464 ntBASIC1.86□□□□□ -2.11
CCDC89Q8N998 MTCO3P18-201ENST00000440206 761 ntBASIC1.86□□□□□ -2.11
CCDC89Q8N998 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC89Q8N998 ACA59.1-201ENST00000515966 143 ntBASIC1.86□□□□□ -2.11
CCDC89Q8N998 AC080013.6-201ENST00000606185 215 ntBASIC1.86□□□□□ -2.11
CCDC89Q8N998 AC009318.2-201ENST00000610917 651 ntBASIC1.86□□□□□ -2.11
CCDC89Q8N998 AC100821.1-201ENST00000523153 2479 ntBASIC1.86□□□□□ -2.11
CCDC89Q8N998 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.86□□□□□ -2.11
CCDC89Q8N998 ICE2P2-201ENST00000483823 2787 ntBASIC1.85□□□□□ -2.11
CCDC89Q8N998 snoU2-30.2-201ENST00000362805 70 ntBASIC1.85□□□□□ -2.11
CCDC89Q8N998 SNORD115-8-201ENST00000363856 82 ntBASIC1.85□□□□□ -2.11
CCDC89Q8N998 RNU6-271P-201ENST00000363858 105 ntBASIC1.85□□□□□ -2.11
CCDC89Q8N998 SNORD115-32-201ENST00000364079 82 ntBASIC1.85□□□□□ -2.11
CCDC89Q8N998 RNU4-75P-201ENST00000364621 146 ntBASIC1.85□□□□□ -2.11
CCDC89Q8N998 SNORD115-38-201ENST00000365037 82 ntBASIC1.85□□□□□ -2.11
CCDC89Q8N998 Y_RNA.402-201ENST00000383972 102 ntBASIC1.85□□□□□ -2.11
CCDC89Q8N998 Z82205.1-201ENST00000428456 297 ntBASIC1.85□□□□□ -2.11
CCDC89Q8N998 UBE2DNL-203ENST00000474922 222 ntBASIC1.85□□□□□ -2.11
CCDC89Q8N998 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC89Q8N998 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC89Q8N998 AC019193.3-201ENST00000609144 554 ntBASIC1.85□□□□□ -2.11
CCDC89Q8N998 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CCDC89Q8N998 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC89Q8N998 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
CCDC89Q8N998 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
CCDC89Q8N998 Y_RNA.414-201ENST00000384011 101 ntBASIC1.84□□□□□ -2.11
CCDC89Q8N998 SNORA67.2-201ENST00000384300 149 ntBASIC1.84□□□□□ -2.11
CCDC89Q8N998 MIR517A-201ENST00000385001 87 ntBASIC1.84□□□□□ -2.11
CCDC89Q8N998 MIR1253-201ENST00000408273 105 ntBASIC1.84□□□□□ -2.11
CCDC89Q8N998 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.84□□□□□ -2.11
CCDC89Q8N998 AL590632.1-201ENST00000424289 371 ntBASIC1.84□□□□□ -2.11
CCDC89Q8N998 AC245517.4-201ENST00000448601 281 ntBASIC1.84□□□□□ -2.11
CCDC89Q8N998 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC89Q8N998 RNU7-66P-201ENST00000459469 62 ntBASIC1.84□□□□□ -2.11
CCDC89Q8N998 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC89Q8N998 MIR3672-201ENST00000584290 82 ntBASIC1.84□□□□□ -2.11
CCDC89Q8N998 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC89Q8N998 AC006001.4-201ENST00000622243 395 ntBASIC1.84□□□□□ -2.11
CCDC89Q8N998 AC008873.1-201ENST00000625051 138 ntBASIC1.84□□□□□ -2.11
CCDC89Q8N998 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
CCDC89Q8N998 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC89Q8N998 Y_RNA.9-201ENST00000362354 101 ntBASIC1.83□□□□□ -2.12
CCDC89Q8N998 RNU6-1090P-201ENST00000364065 94 ntBASIC1.83□□□□□ -2.12
CCDC89Q8N998 Y_RNA.436-201ENST00000384097 102 ntBASIC1.83□□□□□ -2.12
CCDC89Q8N998 MIR32-201ENST00000384965 70 ntBASIC1.83□□□□□ -2.12
CCDC89Q8N998 MIR487A-201ENST00000385009 80 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms