Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.53□□□□□ -2
HERC6Q8IVU3 AL160413.1-201ENST00000622780 310 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.53□□□□□ -2
HERC6Q8IVU3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.53□□□□□ -2
HERC6Q8IVU3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2.01
HERC6Q8IVU3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
HERC6Q8IVU3 RNU6-137P-201ENST00000363680 108 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 RNU1-138P-201ENST00000384093 164 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 RNU1-52P-201ENST00000384190 164 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 RNY4P36-201ENST00000391116 96 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 MTCYBP4-201ENST00000401524 249 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.646-201ENST00000410980 101 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 RNA5SP247-201ENST00000411181 105 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 MTCO2P27-201ENST00000420740 428 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 AC236972.2-201ENST00000434979 310 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 AC007677.1-201ENST00000445757 515 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.52□□□□□ -2.01
HERC6Q8IVU3 RPL23AP42-201ENST00000471152 471 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 RPL7P42-201ENST00000481005 679 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.52□□□□□ -2.01
HERC6Q8IVU3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.52□□□□□ -2.01
HERC6Q8IVU3 SNORA4.4-201ENST00000515921 135 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.52□□□□□ -2.01
HERC6Q8IVU3 MIR4719-201ENST00000585233 84 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 AC100812.1-201ENST00000607622 580 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 AC126177.8-201ENST00000618339 1015 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 AL669831.3-213ENST00000636676 183 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
HERC6Q8IVU3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HERC6Q8IVU3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.138-201ENST00000363462 102 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 RNU6-234P-201ENST00000365229 104 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 RNU1-148P-201ENST00000384472 162 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 RNU6-310P-201ENST00000384655 107 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 SNORA64-201ENST00000384674 134 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 SNORA41-201ENST00000384675 132 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 SNORA40.19-201ENST00000390846 128 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 SRIP3-201ENST00000413200 219 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 EDDM3CP-201ENST00000415977 425 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.51□□□□□ -2.01
HERC6Q8IVU3 RNU7-152P-201ENST00000458982 64 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.653-201ENST00000459091 95 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 AC007215.1-201ENST00000464893 276 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 RPL30P10-201ENST00000488148 337 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 AC068781.1-201ENST00000488231 618 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 AC018868.1-201ENST00000491307 315 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.706-201ENST00000516933 99 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 RNU1-104P-201ENST00000517280 175 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 CBX3P8-201ENST00000532412 525 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 AC104581.2-201ENST00000572227 430 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 MIR5194-201ENST00000582634 120 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 AL353621.2-201ENST00000605340 133 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 AL132822.1-201ENST00000617063 513 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 AC092881.1-201ENST00000638218 2733 ntBASIC2.51□□□□□ -2.01
HERC6Q8IVU3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HERC6Q8IVU3 AL356292.1-201ENST00000283110 373 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 RNU6-743P-201ENST00000364151 106 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.315-201ENST00000365117 102 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 RNU6-1026P-201ENST00000384465 108 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 RNU6-331P-201ENST00000384724 107 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 RNA5SP270-201ENST00000411361 118 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 AL354751.2-201ENST00000415471 210 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.5□□□□□ -2.01
HERC6Q8IVU3 MTCYBP10-201ENST00000424905 650 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.5□□□□□ -2.01
HERC6Q8IVU3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.5□□□□□ -2.01
HERC6Q8IVU3 AL035666.1-201ENST00000446195 348 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 AL137159.1-201ENST00000452808 512 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 AC027575.1-201ENST00000481064 460 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 AC107032.1-201ENST00000485945 480 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 RNA5SP384-201ENST00000516615 116 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 RNA5SP402-201ENST00000517148 110 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 ANP32BP3-201ENST00000559213 706 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.5□□□□□ -2.01
HERC6Q8IVU3 AC005562.2-201ENST00000618264 111 ntBASIC2.5□□□□□ -2.01
HERC6Q8IVU3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.48-201ENST00000362710 103 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 RNY1P16-201ENST00000363063 111 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 RNU6-438P-201ENST00000365561 103 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.49□□□□□ -2.01
HERC6Q8IVU3 AC027124.2-201ENST00000428249 105 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.49□□□□□ -2.01
HERC6Q8IVU3 ELOCP24-201ENST00000456370 334 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 RPL30P15-201ENST00000457129 321 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 AC097473.1-201ENST00000508142 408 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.49□□□□□ -2.01
HERC6Q8IVU3 RNU6-120P-201ENST00000516077 103 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 SNORA31.11-201ENST00000516528 139 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.49□□□□□ -2.01
HERC6Q8IVU3 AC010928.2-201ENST00000588017 287 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 AL137847.3-201ENST00000611521 109 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 TCL6_2.1-201ENST00000615162 119 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 AC099654.10-201ENST00000640395 161 ntBASIC2.49□□□□□ -2.01
HERC6Q8IVU3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
HERC6Q8IVU3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HERC6Q8IVU3 BX322639.1-202ENST00000423987 2213 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.132-201ENST00000363421 102 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 RNA5SP393-201ENST00000363423 117 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms