Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
DDX53Q86TM3 AC010329.5-201ENST00000623497 2174 ntBASIC3.21□□□□□ -1.9
DDX53Q86TM3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DDX53Q86TM3 RNA5SP432-201ENST00000362480 116 ntBASIC3.21□□□□□ -1.9
DDX53Q86TM3 SNORD63-201ENST00000384262 68 ntBASIC3.21□□□□□ -1.9
DDX53Q86TM3 RNU6-851P-201ENST00000384565 107 ntBASIC3.21□□□□□ -1.9
DDX53Q86TM3 AL033519.2-201ENST00000403958 392 ntBASIC3.21□□□□□ -1.9
DDX53Q86TM3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX53Q86TM3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX53Q86TM3 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.21□□□□□ -1.9
DDX53Q86TM3 RNU2-44P-201ENST00000516795 194 ntBASIC3.21□□□□□ -1.9
DDX53Q86TM3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX53Q86TM3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX53Q86TM3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX53Q86TM3 AL713866.2-201ENST00000603579 219 ntBASIC3.21□□□□□ -1.9
DDX53Q86TM3 MIR7157-201ENST00000635801 60 ntBASIC3.21□□□□□ -1.9
DDX53Q86TM3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX53Q86TM3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX53Q86TM3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
DDX53Q86TM3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
DDX53Q86TM3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.2□□□□□ -1.9
DDX53Q86TM3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DDX53Q86TM3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DDX53Q86TM3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC073325.2-201ENST00000339545 159 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 SNORD32B-201ENST00000364460 84 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 RNA5SP126-201ENST00000365092 109 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 Y_RNA.462-201ENST00000384268 102 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 RNU6-102P-201ENST00000384485 104 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX53Q86TM3 RNU6-625P-201ENST00000459412 107 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC006483.1-201ENST00000487308 313 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.2□□□□□ -1.9
DDX53Q86TM3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 CYCSP23-201ENST00000519781 313 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC018448.1-201ENST00000552843 316 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC233702.2-202ENST00000562547 291 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC105245.1-201ENST00000581934 244 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC023043.3-201ENST00000593113 385 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC010620.2-201ENST00000600135 313 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC090425.1-201ENST00000610007 140 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 AC080128.1-201ENST00000474389 1917 ntBASIC3.2□□□□□ -1.9
DDX53Q86TM3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.2□□□□□ -1.9
DDX53Q86TM3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.2□□□□□ -1.9
DDX53Q86TM3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
DDX53Q86TM3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX53Q86TM3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX53Q86TM3 Y_RNA.415-201ENST00000384012 112 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 Y_RNA.447-201ENST00000384184 113 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 Y_RNA.476-201ENST00000384347 108 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 Y_RNA.581-201ENST00000391017 97 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 U6atac.2-201ENST00000408644 118 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 RNU4-30P-201ENST00000410245 143 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 AC105272.1-201ENST00000438604 198 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 AC090515.1-201ENST00000465295 476 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 AC074133.1-201ENST00000515696 183 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX53Q86TM3 AC107016.2-201ENST00000547968 190 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 MIR6715A-201ENST00000615929 79 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 AP001282.2-201ENST00000616149 309 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX53Q86TM3 MTND5P6-201ENST00000422338 1798 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 AC096644.4-201ENST00000563417 2912 ntBASIC3.19□□□□□ -1.9
DDX53Q86TM3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX53Q86TM3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX53Q86TM3 AC092435.3-201ENST00000565538 3654 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 Y_RNA.14-201ENST00000362415 103 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 RNA5SP383-201ENST00000362934 120 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 RNU6-944P-201ENST00000364023 107 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 Y_RNA.350-201ENST00000365409 98 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 Y_RNA.498-201ENST00000384460 102 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 Y_RNA.541-201ENST00000384640 113 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 RNU5A-5P-201ENST00000411054 116 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 ELOCP21-201ENST00000412558 336 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 AC009237.7-201ENST00000447357 229 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 AC107222.1-201ENST00000510899 637 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 RN7SKP132-201ENST00000516001 208 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 RNU6-496P-201ENST00000516145 99 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 RNU7-110P-201ENST00000516891 62 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 AC104027.1-201ENST00000521887 300 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 AK6P2-201ENST00000549020 471 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 MIR4423-201ENST00000580922 80 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX53Q86TM3 AC011373.1-201ENST00000607270 237 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 AC069294.1-201ENST00000608397 350 ntBASIC3.18□□□□□ -1.9
DDX53Q86TM3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX53Q86TM3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX53Q86TM3 MIR449A-201ENST00000362113 91 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 Y_RNA.16-201ENST00000362421 102 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 Y_RNA.237-201ENST00000364439 102 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 Y_RNA.518-201ENST00000384552 113 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 Y_RNA.570-201ENST00000384750 101 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 AC023141.11-201ENST00000508864 202 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms