Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.1□□□□□ -2.07
NPHP3Q7Z494 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.1□□□□□ -2.07
NPHP3Q7Z494 AL078605.1-201ENST00000603529 500 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 AC136443.5-201ENST00000603741 370 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 AL450472.1-202ENST00000637286 180 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.09□□□□□ -2.07
NPHP3Q7Z494 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.09□□□□□ -2.08
NPHP3Q7Z494 CBX3P1-201ENST00000325243 554 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 RNU4-15P-201ENST00000362613 141 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 RNU6-546P-201ENST00000383991 107 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 RNU6-306P-201ENST00000384617 107 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 BTF3L4P2-201ENST00000392798 346 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.09□□□□□ -2.08
NPHP3Q7Z494 AL133396.1-201ENST00000432048 687 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.09□□□□□ -2.08
NPHP3Q7Z494 GPM6BP3-201ENST00000442797 145 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.09□□□□□ -2.08
NPHP3Q7Z494 U8.21-201ENST00000459536 136 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 Y_RNA.682-201ENST00000516457 100 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 RNU6-566P-201ENST00000516790 107 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 AC115990.1-201ENST00000526957 301 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 AP005639.2-201ENST00000527592 928 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 MIR4287-201ENST00000579398 78 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.09□□□□□ -2.08
NPHP3Q7Z494 AC078795.3-201ENST00000602913 472 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 SNRPGP17-201ENST00000603780 214 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 AC012493.3-201ENST00000604494 112 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 AL034555.1-201ENST00000604816 211 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 AL133215.3-201ENST00000609801 448 ntBASIC2.09□□□□□ -2.08
NPHP3Q7Z494 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.09□□□□□ -2.08
NPHP3Q7Z494 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NPHP3Q7Z494 SNORD115-3-201ENST00000363100 82 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 Y_RNA.123-201ENST00000363338 102 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 RNU6-1013P-201ENST00000384180 107 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 RNU6-933P-201ENST00000384424 107 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 RNU6-790P-201ENST00000384479 105 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 SNORA12-201ENST00000391162 147 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 RNU6-510P-201ENST00000391239 108 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 RN7SKP61-201ENST00000410642 295 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 AC078809.1-201ENST00000427601 140 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 RPL31P58-201ENST00000469001 379 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 RNA5SP454-201ENST00000517231 127 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.08□□□□□ -2.08
NPHP3Q7Z494 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.08□□□□□ -2.08
NPHP3Q7Z494 MRPS36P4-201ENST00000534436 298 ntBASIC2.08□□□□□ -2.08
NPHP3Q7Z494 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NPHP3Q7Z494 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.07□□□□□ -2.08
NPHP3Q7Z494 MIR518A2-201ENST00000384966 87 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 MIR517A-201ENST00000385001 87 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 MIR29B2-201ENST00000385055 81 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 U3.40-201ENST00000408706 208 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 Y_RNA.597-201ENST00000410463 100 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 MTND3P8-201ENST00000412909 339 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 MTCO3P46-201ENST00000425787 232 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.07□□□□□ -2.08
NPHP3Q7Z494 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.07□□□□□ -2.08
NPHP3Q7Z494 PCMTD1P1-201ENST00000455560 355 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 AC016632.1-201ENST00000503994 196 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.07□□□□□ -2.08
NPHP3Q7Z494 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.07□□□□□ -2.08
NPHP3Q7Z494 RNU6-965P-201ENST00000516721 96 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.07□□□□□ -2.08
NPHP3Q7Z494 AL356157.2-201ENST00000605122 111 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 AC018889.1-201ENST00000605372 397 ntBASIC2.07□□□□□ -2.08
NPHP3Q7Z494 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.07□□□□□ -2.08
NPHP3Q7Z494 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 Y_RNA.72-201ENST00000362894 103 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 Y_RNA.279-201ENST00000364763 95 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 MIR613-201ENST00000385248 95 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NPHP3Q7Z494 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.06□□□□□ -2.08
NPHP3Q7Z494 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.06□□□□□ -2.08
NPHP3Q7Z494 AC145146.1-201ENST00000496370 254 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 AC022447.4-201ENST00000504053 364 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 RNU7-30P-201ENST00000516835 62 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.06□□□□□ -2.08
NPHP3Q7Z494 MIR4790-201ENST00000577799 79 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 MIR3136-201ENST00000583498 78 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.06□□□□□ -2.08
NPHP3Q7Z494 AC019193.3-201ENST00000609144 554 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 MIR8076-201ENST00000611401 83 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 ZNF702P-202ENST00000434269 1966 ntBASIC2.06□□□□□ -2.08
NPHP3Q7Z494 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.05□□□□□ -2.08
NPHP3Q7Z494 AP000560.1-201ENST00000624150 1937 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 AC092268.1-201ENST00000342691 405 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 RNY1-201ENST00000364228 113 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 RNU6-142P-201ENST00000384019 107 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 RNU6-767P-201ENST00000384132 107 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 SNORA40.19-201ENST00000390846 128 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 SNORA26.3-201ENST00000391119 136 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.05□□□□□ -2.08
NPHP3Q7Z494 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.05□□□□□ -2.08
NPHP3Q7Z494 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.05□□□□□ -2.08
NPHP3Q7Z494 PMCHL2-203ENST00000457791 237 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 AC116353.2-201ENST00000505332 712 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 PRDX4P1-201ENST00000507189 574 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.05□□□□□ -2.08
NPHP3Q7Z494 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms