Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 snoU2_19.4-201ENST00000364329 80 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 Y_RNA.341-201ENST00000365341 102 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 Y_RNA.400-201ENST00000383963 111 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 MIR23B-201ENST00000384832 97 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 MIR670-201ENST00000390142 98 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 RNU6-710P-201ENST00000410424 105 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC009414.1-201ENST00000427200 443 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 RBMY2UP-201ENST00000453474 324 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 MIR449C-201ENST00000516047 92 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 SNORD116-25-201ENST00000516517 92 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 RNU6-1098P-201ENST00000516772 96 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC069294.1-201ENST00000608397 350 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC099778.2-201ENST00000610904 211 ntBASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQA1Q5Y7H0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 Y_RNA.24-201ENST00000362508 103 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 SNORD32B-201ENST00000364460 84 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 Y_RNA.310-201ENST00000365063 113 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 Y_RNA.343-201ENST00000365354 112 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 Y_RNA.368-201ENST00000365547 113 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 Y_RNA.488-201ENST00000384403 102 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 MIR7-3-201ENST00000384898 110 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 MIR626-201ENST00000385032 94 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 AL358232.1-201ENST00000448030 501 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 HMGN2P7-201ENST00000456186 273 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC025518.1-201ENST00000479856 347 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 RPS27P26-201ENST00000494583 239 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC026333.2-201ENST00000542164 106 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 MIR4429-201ENST00000580105 73 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC008739.2-201ENST00000597006 317 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 AL670379.2-201ENST00000604983 252 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 AC008873.1-201ENST00000625051 138 ntBASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1Q5Y7H0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
HLA-DQA1Q5Y7H0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.21□□□□□ -1.89
HLA-DQA1Q5Y7H0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC007256.1-201ENST00000392253 2765 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-151P-201ENST00000364158 107 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 Y_RNA.215-201ENST00000364204 112 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-275P-201ENST00000364910 107 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 MTATP6P29-201ENST00000415057 132 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 YME1L1P1-201ENST00000429435 297 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 SRIP1-201ENST00000489235 288 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 FCF1P8-201ENST00000510322 597 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNA5SP272-201ENST00000516095 111 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 MIR4738-201ENST00000579134 87 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC019176.2-201ENST00000611579 315 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC022149.2-201ENST00000621061 203 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC090517.3-201ENST00000625170 141 ntBASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1Q5Y7H0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU4-35P-201ENST00000362588 141 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU1-105P-201ENST00000363470 161 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 Y_RNA.172-201ENST00000363765 102 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-899P-201ENST00000363947 107 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 SNORA51.4-201ENST00000364993 124 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 SNORA8.3-201ENST00000384679 139 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 Y_RNA.568-201ENST00000384742 113 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms