Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 snoU13.14-201ENST00000459372 104 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 AC140059.1-201ENST00000489238 361 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 HMGB1P35-201ENST00000503360 598 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 RNA5SP112-201ENST00000515937 99 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 AC115990.1-201ENST00000526957 301 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 AC021231.3-201ENST00000558497 370 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 AC103810.1-201ENST00000579873 453 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 MIR3199-1-201ENST00000582434 88 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 AL034555.1-201ENST00000604816 211 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
SLC44A4Q53GD3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.93
SLC44A4Q53GD3 RNU6-655P-201ENST00000362858 107 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 RNU1-76P-201ENST00000362903 159 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 Y_RNA.183-201ENST00000363882 113 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 SNORA68.1-201ENST00000364537 132 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 RNU4-9P-201ENST00000364951 139 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 SNORA9.2-201ENST00000365361 133 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 Y_RNA.552-201ENST00000384665 112 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 RNU6-1093P-201ENST00000391194 107 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 AL590556.1-201ENST00000423231 483 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 RPL30P4-201ENST00000429309 333 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 MTND4LP30-201ENST00000454092 297 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 snoU13.30-201ENST00000458951 104 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 AC073901.1-201ENST00000462471 408 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 TRBVB-201ENST00000477100 408 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 RPL23AP70-201ENST00000483361 460 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 AC107032.1-201ENST00000485945 480 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 AC132942.1-201ENST00000486753 483 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 HMGB3P17-201ENST00000504195 649 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 AC012433.1-201ENST00000588916 398 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 MAPK10-266ENST00000641066 6555 ntBASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.96□□□□□ -1.94
SLC44A4Q53GD3 AC080128.1-201ENST00000474389 1917 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 RNU6-222P-201ENST00000362438 107 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 Y_RNA.27-201ENST00000362540 103 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 SNORA20.1-201ENST00000364790 130 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 MIR549A-201ENST00000385268 96 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 RNA5SP492-201ENST00000411330 114 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 AL445305.1-201ENST00000432577 575 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 AL121890.1-201ENST00000435457 205 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 RPL39P38-201ENST00000467018 153 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 AP004217.1-201ENST00000480579 346 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 YWHAEP4-201ENST00000505390 198 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 RNU7-175P-201ENST00000515915 61 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 RNU6-1023P-201ENST00000516137 106 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 RN7SKP43-201ENST00000516173 320 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 AC104581.2-201ENST00000572227 430 ntBASIC2.95□□□□□ -1.94
SLC44A4Q53GD3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 RNU1-72P-201ENST00000362976 153 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 RNU6-486P-201ENST00000363116 107 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 Y_RNA.562-201ENST00000384695 113 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 MIR181B1-201ENST00000385240 110 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 MTCYBP2-201ENST00000407745 171 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 RNU2-20P-201ENST00000410425 191 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 AC012306.1-201ENST00000423267 114 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 AC025465.3-201ENST00000510570 311 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 AC067942.3-201ENST00000512025 362 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 Y_RNA.706-201ENST00000516933 99 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 AL442163.3-201ENST00000554110 156 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 RPL30P11-203ENST00000598995 310 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 RPL23AP78-201ENST00000599928 470 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 AC010900.2-201ENST00000604508 210 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 AC141273.2-201ENST00000618989 130 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 AC243829.7-201ENST00000633081 225 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 U6.92-201ENST00000636464 89 ntBASIC2.94□□□□□ -1.94
SLC44A4Q53GD3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 RNU4-15P-201ENST00000362613 141 ntBASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 Y_RNA.84-201ENST00000363011 104 ntBASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 U8.10-201ENST00000384260 133 ntBASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 RNU2-25P-201ENST00000411041 191 ntBASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 RNU6-111P-201ENST00000517179 105 ntBASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 AC016256.1-201ENST00000547971 354 ntBASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 AP001282.2-201ENST00000616149 309 ntBASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 U6.104-201ENST00000637979 90 ntBASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
SLC44A4Q53GD3 snoU2_19.2-201ENST00000363024 80 ntBASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 Y_RNA.143-201ENST00000363520 106 ntBASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 RNA5SP274-201ENST00000410484 108 ntBASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms