Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP003716.2-201ENST00000528260 108 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 AP002453.2-201ENST00000533503 320 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 MIR3192-201ENST00000584920 77 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 AC064807.4-201ENST00000607201 407 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 MIR8087-201ENST00000612745 78 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 RNA5SP517-201ENST00000364724 117 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 MIR578-201ENST00000384828 96 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 SNORA26.3-201ENST00000391119 136 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 AL353777.1-201ENST00000425552 326 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 AL358176.2-201ENST00000425769 204 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 MTATP6P16-201ENST00000434543 526 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 AC036111.3-201ENST00000526389 112 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 AP003049.1-201ENST00000529418 457 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 AL391840.1-201ENST00000571144 367 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 AC009994.1-201ENST00000606889 253 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 AL359547.2-201ENST00000615810 418 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 U4.7-201ENST00000638126 106 ntBASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.48□□□□□ -2.49
CCDC58Q4VC31 MIR1253-201ENST00000408273 105 ntBASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 MIR320C1-201ENST00000408566 88 ntBASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 AL354692.1-201ENST00000423044 315 ntBASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 AC078809.1-201ENST00000427601 140 ntBASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 AC104136.1-201ENST00000512969 394 ntBASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 MIR1273G-201ENST00000577677 100 ntBASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 MIR4300-201ENST00000581016 96 ntBASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 AC104458.1-201ENST00000608243 463 ntBASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 AL359075.3-201ENST00000613288 217 ntBASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 AL357075.2-201ENST00000614906 189 ntBASIC-0.49□□□□□ -2.49
CCDC58Q4VC31 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 MIR1197-201ENST00000408818 88 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 AL606489.2-201ENST00000433886 234 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 AC016717.1-201ENST00000448918 286 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 AC091874.1-201ENST00000511402 339 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 RNU6-320P-201ENST00000516511 106 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 AC004584.2-201ENST00000570407 410 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 BCRP9-201ENST00000605312 388 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 AC026741.1-201ENST00000605892 482 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 AC006001.4-201ENST00000622243 395 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 MIR1295B-201ENST00000636144 60 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.5□□□□□ -2.49
CCDC58Q4VC31 RNU6-511P-201ENST00000363496 107 ntBASIC-0.51□□□□□ -2.49
CCDC58Q4VC31 RNU6-960P-201ENST00000364056 120 ntBASIC-0.51□□□□□ -2.49
CCDC58Q4VC31 RNY1-201ENST00000364228 113 ntBASIC-0.51□□□□□ -2.49
CCDC58Q4VC31 PDCL2P1-201ENST00000419302 352 ntBASIC-0.51□□□□□ -2.49
CCDC58Q4VC31 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.51□□□□□ -2.49
CCDC58Q4VC31 AC078795.3-201ENST00000602913 472 ntBASIC-0.51□□□□□ -2.49
CCDC58Q4VC31 RNU4-5P-201ENST00000607255 135 ntBASIC-0.51□□□□□ -2.49
CCDC58Q4VC31 AC138749.5-201ENST00000611461 208 ntBASIC-0.51□□□□□ -2.49
CCDC58Q4VC31 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
CCDC58Q4VC31 RNU6-562P-201ENST00000362731 107 ntBASIC-0.52□□□□□ -2.49
CCDC58Q4VC31 RNU6-716P-201ENST00000365621 103 ntBASIC-0.52□□□□□ -2.49
CCDC58Q4VC31 RNU6-975P-201ENST00000384296 105 ntBASIC-0.52□□□□□ -2.49
CCDC58Q4VC31 MIR1185-1-201ENST00000408598 86 ntBASIC-0.52□□□□□ -2.49
CCDC58Q4VC31 AL139396.1-201ENST00000421137 167 ntBASIC-0.52□□□□□ -2.49
CCDC58Q4VC31 Z99497.2-201ENST00000603634 310 ntBASIC-0.52□□□□□ -2.49
CCDC58Q4VC31 MTND3P19-201ENST00000603825 345 ntBASIC-0.52□□□□□ -2.49
CCDC58Q4VC31 AC112187.2-201ENST00000604345 283 ntBASIC-0.52□□□□□ -2.49
CCDC58Q4VC31 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.52□□□□□ -2.49
CCDC58Q4VC31 MIR1-1-201ENST00000362147 71 ntBASIC-0.53□□□□□ -2.49
CCDC58Q4VC31 MIR145-201ENST00000384967 88 ntBASIC-0.53□□□□□ -2.49
CCDC58Q4VC31 MIR549A-201ENST00000385268 96 ntBASIC-0.53□□□□□ -2.49
CCDC58Q4VC31 AL663109.1-201ENST00000411498 844 ntBASIC-0.53□□□□□ -2.49
CCDC58Q4VC31 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.53□□□□□ -2.49
CCDC58Q4VC31 AL360271.2-201ENST00000447710 161 ntBASIC-0.53□□□□□ -2.49
CCDC58Q4VC31 MIR4764-201ENST00000580680 88 ntBASIC-0.53□□□□□ -2.49
CCDC58Q4VC31 AC097478.2-201ENST00000610572 514 ntBASIC-0.53□□□□□ -2.49
CCDC58Q4VC31 PART1_2.1-201ENST00000612397 250 ntBASIC-0.53□□□□□ -2.49
CCDC58Q4VC31 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 RNU6-354P-201ENST00000383862 107 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 RNU6-756P-201ENST00000383997 107 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 RNU6-207P-201ENST00000384137 107 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 RNU6-610P-201ENST00000384264 107 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 RNU6-424P-201ENST00000384367 105 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 RNU6-929P-201ENST00000384429 107 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 AL031779.1-201ENST00000415663 330 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 AC005002.2-201ENST00000438228 269 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 AC079382.1-201ENST00000493346 557 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 AC026616.1-201ENST00000523157 525 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 AC011712.1-201ENST00000588959 234 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 VN1R87P-201ENST00000596706 487 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 SNORA28-201ENST00000606769 126 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 AC005520.5-201ENST00000613926 164 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms