Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 RNU6-1274P-201ENST00000384557 107 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 MIR218-1-201ENST00000384999 110 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 SNORD58.1-201ENST00000391313 66 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 RNA5SP475-201ENST00000410568 110 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 RNU6-107P-201ENST00000516643 102 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.1□□□□□ -1.91
IRF9Q00978 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.1□□□□□ -1.91
IRF9Q00978 AC105245.1-201ENST00000581934 244 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 MIR3199-1-201ENST00000582434 88 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 AL109918.3-201ENST00000603072 338 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.1□□□□□ -1.91
IRF9Q00978 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
IRF9Q00978 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
IRF9Q00978 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
IRF9Q00978 AL049781.1-201ENST00000623195 3585 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 AC135776.4-201ENST00000624300 1904 ntBASIC3.09□□□□□ -1.91
IRF9Q00978 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
IRF9Q00978 Y_RNA.383-201ENST00000383855 97 ntBASIC3.09□□□□□ -1.91
IRF9Q00978 RNU6-514P-201ENST00000384208 107 ntBASIC3.09□□□□□ -1.91
IRF9Q00978 MIR23A-201ENST00000385245 73 ntBASIC3.09□□□□□ -1.91
IRF9Q00978 AL357075.1-201ENST00000404107 726 ntBASIC3.09□□□□□ -1.91
IRF9Q00978 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
IRF9Q00978 U6atac.2-201ENST00000408644 118 ntBASIC3.09□□□□□ -1.91
IRF9Q00978 RPL19P1-201ENST00000411635 428 ntBASIC3.09□□□□□ -1.91
IRF9Q00978 MRPS10P1-201ENST00000448483 130 ntBASIC3.09□□□□□ -1.91
IRF9Q00978 PHBP14-201ENST00000512887 367 ntBASIC3.09□□□□□ -1.91
IRF9Q00978 RNU6-966P-201ENST00000516479 104 ntBASIC3.09□□□□□ -1.91
IRF9Q00978 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.09□□□□□ -1.91
IRF9Q00978 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.09□□□□□ -1.91
IRF9Q00978 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.09□□□□□ -1.91
IRF9Q00978 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.09□□□□□ -1.91
IRF9Q00978 MIR7975-201ENST00000619350 68 ntBASIC3.09□□□□□ -1.91
IRF9Q00978 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
IRF9Q00978 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
IRF9Q00978 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
IRF9Q00978 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.08□□□□□ -1.92
IRF9Q00978 Y_RNA.65-201ENST00000362846 100 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 Y_RNA.136-201ENST00000363444 102 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 SNORA67.2-201ENST00000384300 149 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 RNVU1-14-201ENST00000384770 164 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 RN7SL20P-201ENST00000488827 297 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 AC083906.5-201ENST00000503722 328 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.08□□□□□ -1.92
IRF9Q00978 RNU4-71P-201ENST00000516258 113 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 RNU5F-4P-201ENST00000516581 114 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 RNU6-586P-201ENST00000517265 104 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.08□□□□□ -1.92
IRF9Q00978 AC009779.6-201ENST00000603972 165 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 AC096577.2-201ENST00000611455 153 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 AC008873.1-201ENST00000625051 138 ntBASIC3.08□□□□□ -1.92
IRF9Q00978 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
IRF9Q00978 AC092593.1-201ENST00000515413 1815 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.07□□□□□ -1.92
IRF9Q00978 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
IRF9Q00978 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
IRF9Q00978 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
IRF9Q00978 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
IRF9Q00978 RNU6-944P-201ENST00000364023 107 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 Y_RNA.418-201ENST00000384029 102 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 SNORD67-201ENST00000390833 111 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 MIR1294-201ENST00000408503 142 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 RNU2-54P-201ENST00000410299 190 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
IRF9Q00978 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.07□□□□□ -1.92
IRF9Q00978 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.07□□□□□ -1.92
IRF9Q00978 Z75741.1-201ENST00000446793 314 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 RNU6-155P-201ENST00000516347 100 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 RNU6-1098P-201ENST00000516772 96 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.07□□□□□ -1.92
IRF9Q00978 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.07□□□□□ -1.92
IRF9Q00978 AC023043.3-201ENST00000593113 385 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 AL133393.1-201ENST00000603277 287 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 AL161756.2-201ENST00000604597 246 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 AC069294.1-201ENST00000608397 350 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
IRF9Q00978 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.07□□□□□ -1.92
IRF9Q00978 AC080128.1-201ENST00000474389 1917 ntBASIC3.07□□□□□ -1.92
IRF9Q00978 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
IRF9Q00978 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
IRF9Q00978 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
IRF9Q00978 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
IRF9Q00978 RNY1-201ENST00000364228 113 ntBASIC3.06□□□□□ -1.92
IRF9Q00978 Y_RNA.269-201ENST00000364685 89 ntBASIC3.06□□□□□ -1.92
IRF9Q00978 RNU6-200P-201ENST00000364743 107 ntBASIC3.06□□□□□ -1.92
IRF9Q00978 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.06□□□□□ -1.92
IRF9Q00978 RNU2-14P-201ENST00000411053 191 ntBASIC3.06□□□□□ -1.92
IRF9Q00978 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.06□□□□□ -1.92
IRF9Q00978 AC009963.1-201ENST00000417265 157 ntBASIC3.06□□□□□ -1.92
IRF9Q00978 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.06□□□□□ -1.92
IRF9Q00978 MTCO1P5-201ENST00000433573 344 ntBASIC3.06□□□□□ -1.92
IRF9Q00978 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.06□□□□□ -1.92
IRF9Q00978 RPL23AP83-201ENST00000434984 473 ntBASIC3.06□□□□□ -1.92
IRF9Q00978 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.06□□□□□ -1.92
IRF9Q00978 RNU6-138P-201ENST00000515952 107 ntBASIC3.06□□□□□ -1.92
IRF9Q00978 AC093331.1-201ENST00000521474 169 ntBASIC3.06□□□□□ -1.92
IRF9Q00978 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.06□□□□□ -1.92
IRF9Q00978 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.06□□□□□ -1.92
IRF9Q00978 MIR4643-201ENST00000577473 78 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms