Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC008134.1-201ENST00000420943 193 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.22□□□□□ -2.44
RPS28P62857 CALM2P4-201ENST00000430810 426 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.22□□□□□ -2.44
RPS28P62857 AC093850.1-201ENST00000454121 251 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 RPS29P1-201ENST00000465274 159 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.22□□□□□ -2.44
RPS28P62857 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
RPS28P62857 AC069113.3-201ENST00000521019 150 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC-0.22□□□□□ -2.44
RPS28P62857 MIR5006-201ENST00000583027 110 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 AL031667.3-201ENST00000620124 655 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 AL450472.1-202ENST00000637286 180 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC-0.23□□□□□ -2.45
RPS28P62857 MIR96-201ENST00000362288 78 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 RNU6-815P-201ENST00000384080 113 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 MIR573-201ENST00000384964 99 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 AC114491.1-201ENST00000416095 246 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 MTND3P17-201ENST00000416968 344 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 AC012306.1-201ENST00000423267 114 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.23□□□□□ -2.45
RPS28P62857 CALM2P2-201ENST00000428512 440 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.23□□□□□ -2.45
RPS28P62857 MTND1P12-201ENST00000455231 147 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 MTCO3P10-201ENST00000455912 772 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 snoU13.23-201ENST00000458863 104 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 AC117522.1-201ENST00000509821 380 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 RNU6-863P-201ENST00000515989 104 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 AC107934.1-201ENST00000522215 217 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 AF235103.2-201ENST00000525753 346 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 MIR3678-201ENST00000578455 94 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 MIR4514-201ENST00000581410 57 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 MIR3192-201ENST00000584920 77 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 AC136443.5-201ENST00000603741 370 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 MTND3P19-201ENST00000603825 345 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 AL158042.1-201ENST00000605338 460 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 MIR6788-201ENST00000618842 66 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 AC015726.2-201ENST00000620112 122 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 AL078595.3-201ENST00000623815 1166 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 AL163152.1-201ENST00000642001 374 ntBASIC-0.23□□□□□ -2.45
RPS28P62857 MIR337-201ENST00000362281 93 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 SNORD114-5-201ENST00000362928 70 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 SNORD56.2-201ENST00000363242 71 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 RNY1P10-201ENST00000363268 113 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 RNU6-424P-201ENST00000384367 105 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 MIR518A1-201ENST00000385068 85 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 MIR548J-201ENST00000408833 112 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 RNU2-70P-201ENST00000410718 179 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 RNA5SP247-201ENST00000411181 105 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.24□□□□□ -2.45
RPS28P62857 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.24□□□□□ -2.45
RPS28P62857 AL353777.1-201ENST00000425552 326 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 SNAP23P1-201ENST00000433229 246 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 AL121890.1-201ENST00000435457 205 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 AC004854.1-201ENST00000440356 349 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 TAF9P1-201ENST00000445421 515 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 TAF9P2-201ENST00000454958 515 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 RNU7-94P-201ENST00000459576 63 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 AC015712.3-201ENST00000559380 164 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 MIR151B-201ENST00000584249 96 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 AC023932.2-201ENST00000603176 175 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 AC068792.1-201ENST00000621354 417 ntBASIC-0.24□□□□□ -2.45
RPS28P62857 SNORA63.3-201ENST00000362682 132 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 RNU6-302P-201ENST00000365249 107 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 RNU6-413P-201ENST00000384115 107 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 MIR520F-201ENST00000384824 87 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 U8.16-201ENST00000391279 133 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 SNORD111-201ENST00000408139 94 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 AC016909.1-201ENST00000415916 166 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.25□□□□□ -2.45
RPS28P62857 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.25□□□□□ -2.45
RPS28P62857 AC004386.2-201ENST00000441858 148 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.25□□□□□ -2.45
RPS28P62857 AC007327.1-201ENST00000447461 264 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 MTCO2P18-201ENST00000457151 658 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 AC008628.2-201ENST00000502605 298 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 AC091874.1-201ENST00000511402 339 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 MTATP6P15-201ENST00000527233 835 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
RPS28P62857 AC023050.3-201ENST00000541142 333 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.25□□□□□ -2.45
RPS28P62857 AC026470.2-201ENST00000561492 181 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 BNIP3P22-201ENST00000593399 556 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 AC005776.1-201ENST00000603164 290 ntBASIC-0.25□□□□□ -2.45
RPS28P62857 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
RPS28P62857 MIR1-1-201ENST00000362147 71 ntBASIC-0.26□□□□□ -2.45
RPS28P62857 RNA5SP126-201ENST00000365092 109 ntBASIC-0.26□□□□□ -2.45
RPS28P62857 SNORA24.1-201ENST00000384401 135 ntBASIC-0.26□□□□□ -2.45
RPS28P62857 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.26□□□□□ -2.45
RPS28P62857 RNA5SP193-201ENST00000410353 107 ntBASIC-0.26□□□□□ -2.45
RPS28P62857 SNORA40.8-201ENST00000411034 126 ntBASIC-0.26□□□□□ -2.45
RPS28P62857 MTND4P15-201ENST00000437913 1033 ntBASIC-0.26□□□□□ -2.45
RPS28P62857 RNU7-57P-201ENST00000459540 60 ntBASIC-0.26□□□□□ -2.45
RPS28P62857 AC108729.3-201ENST00000513484 108 ntBASIC-0.26□□□□□ -2.45
RPS28P62857 RNU7-12P-201ENST00000516030 62 ntBASIC-0.26□□□□□ -2.45
RPS28P62857 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.26□□□□□ -2.45
RPS28P62857 AC078938.1-201ENST00000620993 318 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms