Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 Y_RNA.287-201ENST00000364853 94 ntBASIC0.67□□□□□ -2.3
ACTBP60709 RNU4-48P-201ENST00000365559 182 ntBASIC0.67□□□□□ -2.3
ACTBP60709 RNU6-1093P-201ENST00000391194 107 ntBASIC0.67□□□□□ -2.3
ACTBP60709 RPS26P42-201ENST00000413485 326 ntBASIC0.67□□□□□ -2.3
ACTBP60709 AC010099.3-201ENST00000423896 409 ntBASIC0.67□□□□□ -2.3
ACTBP60709 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.67□□□□□ -2.3
ACTBP60709 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.67□□□□□ -2.3
ACTBP60709 RN7SKP49-201ENST00000516675 260 ntBASIC0.67□□□□□ -2.3
ACTBP60709 AC026470.2-201ENST00000561492 181 ntBASIC0.67□□□□□ -2.3
ACTBP60709 AC008088.1-201ENST00000580993 280 ntBASIC0.67□□□□□ -2.3
ACTBP60709 AL390123.1-201ENST00000603216 237 ntBASIC0.67□□□□□ -2.3
ACTBP60709 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.67□□□□□ -2.3
ACTBP60709 AC005562.2-201ENST00000618264 111 ntBASIC0.67□□□□□ -2.3
ACTBP60709 RNY4P34-201ENST00000364779 95 ntBASIC0.66□□□□□ -2.3
ACTBP60709 RNU6-925P-201ENST00000384629 104 ntBASIC0.66□□□□□ -2.3
ACTBP60709 RNU6-950P-201ENST00000384651 107 ntBASIC0.66□□□□□ -2.3
ACTBP60709 RNU6-1031P-201ENST00000384773 107 ntBASIC0.66□□□□□ -2.3
ACTBP60709 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
ACTBP60709 RNU11-5P-201ENST00000391216 129 ntBASIC0.66□□□□□ -2.3
ACTBP60709 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.66□□□□□ -2.3
ACTBP60709 AC090960.1-201ENST00000421072 306 ntBASIC0.66□□□□□ -2.3
ACTBP60709 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.66□□□□□ -2.3
ACTBP60709 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.66□□□□□ -2.3
ACTBP60709 MTCO2P3-201ENST00000442543 421 ntBASIC0.66□□□□□ -2.3
ACTBP60709 SNRPFP3-201ENST00000457792 225 ntBASIC0.66□□□□□ -2.3
ACTBP60709 PDCD5P2-201ENST00000507570 312 ntBASIC0.66□□□□□ -2.3
ACTBP60709 SNORA31.4-201ENST00000516049 129 ntBASIC0.66□□□□□ -2.3
ACTBP60709 SNORA31.10-201ENST00000516482 106 ntBASIC0.66□□□□□ -2.3
ACTBP60709 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.66□□□□□ -2.3
ACTBP60709 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.66□□□□□ -2.3
ACTBP60709 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.66□□□□□ -2.3
ACTBP60709 MIR5695-201ENST00000579717 85 ntBASIC0.66□□□□□ -2.3
ACTBP60709 MIR3973-201ENST00000579824 107 ntBASIC0.66□□□□□ -2.3
ACTBP60709 AL929325.1-201ENST00000603096 117 ntBASIC0.66□□□□□ -2.3
ACTBP60709 AC016727.2-201ENST00000603988 621 ntBASIC0.66□□□□□ -2.3
ACTBP60709 AC092354.1-201ENST00000606057 376 ntBASIC0.66□□□□□ -2.3
ACTBP60709 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.66□□□□□ -2.3
ACTBP60709 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
ACTBP60709 MIR6767-201ENST00000637302 66 ntBASIC0.66□□□□□ -2.3
ACTBP60709 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.66□□□□□ -2.3
ACTBP60709 RNU4-79P-201ENST00000362764 141 ntBASIC0.65□□□□□ -2.31
ACTBP60709 Y_RNA.355-201ENST00000365462 98 ntBASIC0.65□□□□□ -2.31
ACTBP60709 MIR200A-201ENST00000384875 90 ntBASIC0.65□□□□□ -2.31
ACTBP60709 SNORD12-201ENST00000391002 90 ntBASIC0.65□□□□□ -2.31
ACTBP60709 RNA5SP109-201ENST00000391010 116 ntBASIC0.65□□□□□ -2.31
ACTBP60709 RNU6-1054P-201ENST00000411293 104 ntBASIC0.65□□□□□ -2.31
ACTBP60709 RNU6-195P-201ENST00000411352 109 ntBASIC0.65□□□□□ -2.31
ACTBP60709 AL606517.2-201ENST00000442855 241 ntBASIC0.65□□□□□ -2.31
ACTBP60709 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.65□□□□□ -2.31
ACTBP60709 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.65□□□□□ -2.31
ACTBP60709 AC016717.1-201ENST00000448918 286 ntBASIC0.65□□□□□ -2.31
ACTBP60709 SCARNA18-201ENST00000459004 134 ntBASIC0.65□□□□□ -2.31
ACTBP60709 MTND3P3-201ENST00000505004 126 ntBASIC0.65□□□□□ -2.31
ACTBP60709 RNU6-1146P-201ENST00000516282 102 ntBASIC0.65□□□□□ -2.31
ACTBP60709 AC069113.1-201ENST00000517763 267 ntBASIC0.65□□□□□ -2.31
ACTBP60709 SUMO2P16-201ENST00000519475 264 ntBASIC0.65□□□□□ -2.31
ACTBP60709 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
ACTBP60709 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.65□□□□□ -2.31
ACTBP60709 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.65□□□□□ -2.31
ACTBP60709 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.65□□□□□ -2.31
ACTBP60709 SNORA4-201ENST00000584302 138 ntBASIC0.65□□□□□ -2.31
ACTBP60709 MIR548AB-201ENST00000584917 84 ntBASIC0.65□□□□□ -2.31
ACTBP60709 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.65□□□□□ -2.31
ACTBP60709 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.65□□□□□ -2.31
ACTBP60709 TCL6_2.1-201ENST00000615162 119 ntBASIC0.65□□□□□ -2.31
ACTBP60709 MIR6788-201ENST00000618842 66 ntBASIC0.65□□□□□ -2.31
ACTBP60709 U6.108-201ENST00000637764 58 ntBASIC0.65□□□□□ -2.31
ACTBP60709 RNU5B-2P-201ENST00000363036 113 ntBASIC0.64□□□□□ -2.31
ACTBP60709 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.64□□□□□ -2.31
ACTBP60709 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.64□□□□□ -2.31
ACTBP60709 AC004866.1-201ENST00000411748 78 ntBASIC0.64□□□□□ -2.31
ACTBP60709 HMGN1P14-201ENST00000412459 517 ntBASIC0.64□□□□□ -2.31
ACTBP60709 AC114482.1-201ENST00000418010 247 ntBASIC0.64□□□□□ -2.31
ACTBP60709 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.64□□□□□ -2.31
ACTBP60709 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
ACTBP60709 AC009237.7-201ENST00000447357 229 ntBASIC0.64□□□□□ -2.31
ACTBP60709 NFU1P2-201ENST00000448700 469 ntBASIC0.64□□□□□ -2.31
ACTBP60709 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.64□□□□□ -2.31
ACTBP60709 snoU13.6-201ENST00000458785 104 ntBASIC0.64□□□□□ -2.31
ACTBP60709 RNU7-167P-201ENST00000459160 62 ntBASIC0.64□□□□□ -2.31
ACTBP60709 AC092991.1-201ENST00000477176 376 ntBASIC0.64□□□□□ -2.31
ACTBP60709 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.64□□□□□ -2.31
ACTBP60709 SNORA31.2-201ENST00000516019 134 ntBASIC0.64□□□□□ -2.31
ACTBP60709 RNU6-197P-201ENST00000516680 100 ntBASIC0.64□□□□□ -2.31
ACTBP60709 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.64□□□□□ -2.31
ACTBP60709 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.64□□□□□ -2.31
ACTBP60709 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.64□□□□□ -2.31
ACTBP60709 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
ACTBP60709 Y_RNA.796-201ENST00000364268 102 ntBASIC0.63□□□□□ -2.31
ACTBP60709 Y_RNA.799-201ENST00000364992 102 ntBASIC0.63□□□□□ -2.31
ACTBP60709 RNU6-417P-201ENST00000384712 107 ntBASIC0.63□□□□□ -2.31
ACTBP60709 RNU6-606P-201ENST00000384721 111 ntBASIC0.63□□□□□ -2.31
ACTBP60709 MIR586-201ENST00000385035 97 ntBASIC0.63□□□□□ -2.31
ACTBP60709 SNORA12.1-201ENST00000390873 148 ntBASIC0.63□□□□□ -2.31
ACTBP60709 RNU6-584P-201ENST00000410350 95 ntBASIC0.63□□□□□ -2.31
ACTBP60709 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
ACTBP60709 AC016909.1-201ENST00000415916 166 ntBASIC0.63□□□□□ -2.31
ACTBP60709 AC011233.1-201ENST00000422812 283 ntBASIC0.63□□□□□ -2.31
ACTBP60709 RPL31P35-201ENST00000431058 377 ntBASIC0.63□□□□□ -2.31
ACTBP60709 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 386.6 ms