Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.16
LIM2P55344 MIR340-201ENST00000362125 95 ntBASIC1.53□□□□□ -2.16
LIM2P55344 RNU6-137P-201ENST00000363680 108 ntBASIC1.53□□□□□ -2.16
LIM2P55344 RNU4-9P-201ENST00000364951 139 ntBASIC1.53□□□□□ -2.16
LIM2P55344 RNA5SP190-201ENST00000365222 118 ntBASIC1.53□□□□□ -2.16
LIM2P55344 RNU6-790P-201ENST00000384479 105 ntBASIC1.53□□□□□ -2.16
LIM2P55344 RN7SKP101-201ENST00000411376 320 ntBASIC1.53□□□□□ -2.16
LIM2P55344 EIF1P1-201ENST00000421436 341 ntBASIC1.53□□□□□ -2.16
LIM2P55344 MTCO1P44-201ENST00000441935 243 ntBASIC1.53□□□□□ -2.16
LIM2P55344 AC006026.1-201ENST00000444025 1803 ntBASIC1.53□□□□□ -2.16
LIM2P55344 AC009237.7-201ENST00000447357 229 ntBASIC1.53□□□□□ -2.16
LIM2P55344 snoU13.6-201ENST00000458785 104 ntBASIC1.53□□□□□ -2.16
LIM2P55344 AC130509.1-201ENST00000464158 433 ntBASIC1.53□□□□□ -2.16
LIM2P55344 RNA5SP54-201ENST00000516951 92 ntBASIC1.53□□□□□ -2.16
LIM2P55344 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.53□□□□□ -2.16
LIM2P55344 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.53□□□□□ -2.16
LIM2P55344 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.53□□□□□ -2.16
LIM2P55344 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.53□□□□□ -2.16
LIM2P55344 MRPS36P4-201ENST00000534436 298 ntBASIC1.53□□□□□ -2.16
LIM2P55344 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.53□□□□□ -2.16
LIM2P55344 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.53□□□□□ -2.16
LIM2P55344 POLR3GP2-201ENST00000588366 668 ntBASIC1.53□□□□□ -2.16
LIM2P55344 AC010900.2-201ENST00000604508 210 ntBASIC1.53□□□□□ -2.16
LIM2P55344 AC124303.1-201ENST00000605703 360 ntBASIC1.53□□□□□ -2.16
LIM2P55344 AL590240.4-201ENST00000616908 390 ntBASIC1.53□□□□□ -2.16
LIM2P55344 AC006504.8-201ENST00000621046 635 ntBASIC1.53□□□□□ -2.16
LIM2P55344 SNORD50.1-201ENST00000362987 71 ntBASIC1.52□□□□□ -2.17
LIM2P55344 SNORD114-6-201ENST00000364393 72 ntBASIC1.52□□□□□ -2.17
LIM2P55344 SNORA18.2-201ENST00000383865 132 ntBASIC1.52□□□□□ -2.17
LIM2P55344 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
LIM2P55344 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LIM2P55344 HMGN2P23-201ENST00000456759 269 ntBASIC1.52□□□□□ -2.17
LIM2P55344 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.52□□□□□ -2.17
LIM2P55344 snoU13.23-201ENST00000458863 104 ntBASIC1.52□□□□□ -2.17
LIM2P55344 AC087477.1-201ENST00000465747 340 ntBASIC1.52□□□□□ -2.17
LIM2P55344 AC114982.1-201ENST00000469402 321 ntBASIC1.52□□□□□ -2.17
LIM2P55344 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.52□□□□□ -2.17
LIM2P55344 RPL23AP75-201ENST00000491601 451 ntBASIC1.52□□□□□ -2.17
LIM2P55344 AC067942.3-201ENST00000512025 362 ntBASIC1.52□□□□□ -2.17
LIM2P55344 AC011352.1-201ENST00000512300 793 ntBASIC1.52□□□□□ -2.17
LIM2P55344 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.52□□□□□ -2.17
LIM2P55344 AP005660.1-201ENST00000522972 293 ntBASIC1.52□□□□□ -2.17
LIM2P55344 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.52□□□□□ -2.17
LIM2P55344 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.52□□□□□ -2.17
LIM2P55344 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.52□□□□□ -2.17
LIM2P55344 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.52□□□□□ -2.17
LIM2P55344 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.52□□□□□ -2.17
LIM2P55344 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.52□□□□□ -2.17
LIM2P55344 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.52□□□□□ -2.17
LIM2P55344 DEFB122-202ENST00000569013 197 ntBASIC1.52□□□□□ -2.17
LIM2P55344 AC010928.2-201ENST00000588017 287 ntBASIC1.52□□□□□ -2.17
LIM2P55344 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.52□□□□□ -2.17
LIM2P55344 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.52□□□□□ -2.17
LIM2P55344 MIR3662-201ENST00000637030 95 ntBASIC1.52□□□□□ -2.17
LIM2P55344 AC073869.6-201ENST00000640656 341 ntBASIC1.52□□□□□ -2.17
LIM2P55344 Y_RNA.132-201ENST00000363421 102 ntBASIC1.51□□□□□ -2.17
LIM2P55344 Y_RNA.151-201ENST00000363566 112 ntBASIC1.51□□□□□ -2.17
LIM2P55344 RNU6-245P-201ENST00000384020 107 ntBASIC1.51□□□□□ -2.17
LIM2P55344 MIR517A-201ENST00000385001 87 ntBASIC1.51□□□□□ -2.17
LIM2P55344 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
LIM2P55344 MIR1283-1-201ENST00000408494 87 ntBASIC1.51□□□□□ -2.17
LIM2P55344 MTND4LP16-201ENST00000440828 295 ntBASIC1.51□□□□□ -2.17
LIM2P55344 SNRPEP8-201ENST00000442866 260 ntBASIC1.51□□□□□ -2.17
LIM2P55344 AC074290.1-201ENST00000448883 135 ntBASIC1.51□□□□□ -2.17
LIM2P55344 SNORD13-201ENST00000459299 104 ntBASIC1.51□□□□□ -2.17
LIM2P55344 RNU2-44P-201ENST00000516795 194 ntBASIC1.51□□□□□ -2.17
LIM2P55344 RNU6-856P-201ENST00000516959 98 ntBASIC1.51□□□□□ -2.17
LIM2P55344 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.51□□□□□ -2.17
LIM2P55344 DEFB131C-201ENST00000528817 165 ntBASIC1.51□□□□□ -2.17
LIM2P55344 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.51□□□□□ -2.17
LIM2P55344 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.51□□□□□ -2.17
LIM2P55344 AC016727.2-201ENST00000603988 621 ntBASIC1.51□□□□□ -2.17
LIM2P55344 MIR3976-201ENST00000606807 139 ntBASIC1.51□□□□□ -2.17
LIM2P55344 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.51□□□□□ -2.17
LIM2P55344 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
LIM2P55344 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LIM2P55344 RNU6-1252P-201ENST00000363054 104 ntBASIC1.5□□□□□ -2.17
LIM2P55344 RNU5F-3P-201ENST00000363767 117 ntBASIC1.5□□□□□ -2.17
LIM2P55344 U8.10-201ENST00000384260 133 ntBASIC1.5□□□□□ -2.17
LIM2P55344 Y_RNA.490-201ENST00000384413 102 ntBASIC1.5□□□□□ -2.17
LIM2P55344 SNORD115-47-201ENST00000391226 86 ntBASIC1.5□□□□□ -2.17
LIM2P55344 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LIM2P55344 FCF1P9-201ENST00000412546 282 ntBASIC1.5□□□□□ -2.17
LIM2P55344 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.5□□□□□ -2.17
LIM2P55344 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.5□□□□□ -2.17
LIM2P55344 AC139712.2-201ENST00000424302 339 ntBASIC1.5□□□□□ -2.17
LIM2P55344 MTCO3P46-201ENST00000425787 232 ntBASIC1.5□□□□□ -2.17
LIM2P55344 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.5□□□□□ -2.17
LIM2P55344 MTND1P17-201ENST00000448961 204 ntBASIC1.5□□□□□ -2.17
LIM2P55344 FGF7P6-202ENST00000451282 293 ntBASIC1.5□□□□□ -2.17
LIM2P55344 AC010531.2-201ENST00000465012 153 ntBASIC1.5□□□□□ -2.17
LIM2P55344 RNU6-344P-201ENST00000516635 111 ntBASIC1.5□□□□□ -2.17
LIM2P55344 SUMO2P18-201ENST00000518873 252 ntBASIC1.5□□□□□ -2.17
LIM2P55344 SUB1P4-201ENST00000566062 339 ntBASIC1.5□□□□□ -2.17
LIM2P55344 MIR4753-201ENST00000585119 83 ntBASIC1.5□□□□□ -2.17
LIM2P55344 AP000907.4-201ENST00000604143 237 ntBASIC1.5□□□□□ -2.17
LIM2P55344 AC019193.3-201ENST00000609144 554 ntBASIC1.5□□□□□ -2.17
LIM2P55344 AL353149.1-201ENST00000610667 244 ntBASIC1.5□□□□□ -2.17
LIM2P55344 AC002553.4-201ENST00000616896 331 ntBASIC1.5□□□□□ -2.17
LIM2P55344 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms