Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR6128-201ENST00000615528 109 ntBASIC2.07□□□□□ -2.08
LIMK1P53667 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LIMK1P53667 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.07□□□□□ -2.08
LIMK1P53667 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.07□□□□□ -2.08
LIMK1P53667 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
LIMK1P53667 Y_RNA.135-201ENST00000363439 95 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 RNU6-784P-201ENST00000384330 106 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 RNU11-3P-201ENST00000391111 133 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 RNA5SP465-201ENST00000391195 109 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 RNA5SP489-201ENST00000410986 109 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 AC027124.2-201ENST00000428249 105 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 DAP3P1-201ENST00000441522 278 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.06□□□□□ -2.08
LIMK1P53667 RPS23P5-201ENST00000495419 428 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 MTCO2P30-201ENST00000503662 364 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 Y_RNA.682-201ENST00000516457 100 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 RNA5SP454-201ENST00000517231 127 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.06□□□□□ -2.08
LIMK1P53667 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.06□□□□□ -2.08
LIMK1P53667 AC130454.1-201ENST00000622948 401 ntBASIC2.06□□□□□ -2.08
LIMK1P53667 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
LIMK1P53667 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LIMK1P53667 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LIMK1P53667 Y_RNA.248-201ENST00000364501 109 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LIMK1P53667 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.05□□□□□ -2.08
LIMK1P53667 AC092473.1-201ENST00000441098 221 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 snoU13.18-201ENST00000459483 104 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 AL163540.1-201ENST00000485382 386 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 RNU6-1098P-201ENST00000516772 96 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.05□□□□□ -2.08
LIMK1P53667 AP003033.1-201ENST00000527244 415 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 AC060780.3-201ENST00000589464 80 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 7SK.7-201ENST00000603504 247 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 AL022345.1-201ENST00000607292 135 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 AC005520.5-201ENST00000613926 164 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 AC137590.2-201ENST00000619709 240 ntBASIC2.05□□□□□ -2.08
LIMK1P53667 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LIMK1P53667 CBX3P1-201ENST00000325243 554 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 RNU5B-2P-201ENST00000363036 113 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 Y_RNA.122-201ENST00000363331 96 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 SNORA18.2-201ENST00000383865 132 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 SNORA8-201ENST00000384574 139 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 RNU6-876P-201ENST00000391295 104 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 AL356776.1-201ENST00000406574 447 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.04□□□□□ -2.08
LIMK1P53667 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.04□□□□□ -2.08
LIMK1P53667 FGF7P6-202ENST00000451282 293 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 RNU6-329P-201ENST00000459618 107 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 AC087477.1-201ENST00000465747 340 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 HMGB3P17-201ENST00000504195 649 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 TRMT112P2-201ENST00000512910 132 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 RNU2-44P-201ENST00000516795 194 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.04□□□□□ -2.08
LIMK1P53667 RPL17P51-201ENST00000605218 238 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 CASC19-280ENST00000642102 1351 ntBASIC2.04□□□□□ -2.08
LIMK1P53667 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
LIMK1P53667 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LIMK1P53667 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LIMK1P53667 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
LIMK1P53667 Y_RNA.99-201ENST00000363138 105 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 Y_RNA.301-201ENST00000364990 103 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 BTF3P4-201ENST00000418852 495 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 RPL30P16-201ENST00000419341 429 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.03□□□□□ -2.08
LIMK1P53667 BX510359.4-201ENST00000423750 193 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 SNRPEP8-201ENST00000442866 260 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.03□□□□□ -2.08
LIMK1P53667 RPL23AP75-201ENST00000491601 451 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 AC005840.1-201ENST00000498412 377 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.03□□□□□ -2.08
LIMK1P53667 SUB1P3-201ENST00000564581 315 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 AC005668.1-201ENST00000571142 476 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 MIR3683-201ENST00000580847 82 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 MIR4742-201ENST00000581069 85 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 AC009994.1-201ENST00000606889 253 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 AL359314.1-201ENST00000616913 261 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 U1.36-201ENST00000620684 176 ntBASIC2.03□□□□□ -2.08
LIMK1P53667 Y_RNA.72-201ENST00000362894 103 ntBASIC2.02□□□□□ -2.09
LIMK1P53667 Y_RNA.160-201ENST00000363677 92 ntBASIC2.02□□□□□ -2.09
LIMK1P53667 RNU6-160P-201ENST00000384591 107 ntBASIC2.02□□□□□ -2.09
LIMK1P53667 MIR320B2-201ENST00000408479 138 ntBASIC2.02□□□□□ -2.09
LIMK1P53667 MTND3P8-201ENST00000412909 339 ntBASIC2.02□□□□□ -2.09
LIMK1P53667 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.02□□□□□ -2.09
LIMK1P53667 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.02□□□□□ -2.09
LIMK1P53667 MTND5P9-201ENST00000503854 1755 ntBASIC2.01□□□□□ -2.09
LIMK1P53667 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LIMK1P53667 SNORD50.1-201ENST00000362987 71 ntBASIC2.01□□□□□ -2.09
LIMK1P53667 Y_RNA.132-201ENST00000363421 102 ntBASIC2.01□□□□□ -2.09
LIMK1P53667 MIR32-201ENST00000384965 70 ntBASIC2.01□□□□□ -2.09
LIMK1P53667 SNORA40.18-201ENST00000391200 128 ntBASIC2.01□□□□□ -2.09
LIMK1P53667 MTND1P2-201ENST00000430604 821 ntBASIC2.01□□□□□ -2.09
LIMK1P53667 AL035666.1-201ENST00000446195 348 ntBASIC2.01□□□□□ -2.09
LIMK1P53667 RPL23AP7-203ENST00000449021 469 ntBASIC2.01□□□□□ -2.09
LIMK1P53667 OR2AQ1P-201ENST00000451972 200 ntBASIC2.01□□□□□ -2.09
LIMK1P53667 RPL31P58-201ENST00000469001 379 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms