Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC087588.2-201ENST00000617667 426 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 MTND4P1-201ENST00000457501 1466 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLCN3P51790 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
CLCN3P51790 RNU6-874P-201ENST00000362390 105 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 Y_RNA.123-201ENST00000363338 102 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 RNU6-99P-201ENST00000364721 107 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 RNA5SP125-201ENST00000364843 120 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 Y_RNA.428-201ENST00000384078 102 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 Y_RNA.504-201ENST00000384481 104 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CLCN3P51790 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLCN3P51790 MIR548F4-201ENST00000408515 105 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 SNORA11.4-201ENST00000408823 129 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 RNU6-985P-201ENST00000410182 104 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.42□□□□□ -2.02
CLCN3P51790 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.42□□□□□ -2.02
CLCN3P51790 AL590556.1-201ENST00000423231 483 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 AL358176.2-201ENST00000425769 204 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 CR769767.1-201ENST00000436337 346 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.42□□□□□ -2.02
CLCN3P51790 AC105758.1-201ENST00000506038 399 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.42□□□□□ -2.02
CLCN3P51790 GNAI2P1-201ENST00000541815 315 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.42□□□□□ -2.02
CLCN3P51790 AC104581.2-201ENST00000572227 430 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 AC092447.9-201ENST00000603395 144 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 AC104695.3-201ENST00000604052 296 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 AC005520.5-201ENST00000613926 164 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 MIR4272-201ENST00000635924 64 ntBASIC2.42□□□□□ -2.02
CLCN3P51790 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.42□□□□□ -2.02
CLCN3P51790 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.42□□□□□ -2.02
CLCN3P51790 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
CLCN3P51790 ZNF271P-202ENST00000465539 1970 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.41□□□□□ -2.02
CLCN3P51790 Y_RNA.133-201ENST00000363428 110 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 RNU4-42P-201ENST00000364738 142 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 MTCYBP2-201ENST00000407745 171 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 RNU6-1156P-201ENST00000410365 100 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.41□□□□□ -2.02
CLCN3P51790 AL358453.1-201ENST00000422522 250 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 AL160004.2-201ENST00000432935 350 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 RNU6-1046P-201ENST00000516538 107 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 SNORA31.15-201ENST00000516771 132 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 SNORA31.16-201ENST00000516773 139 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 RNU6-264P-201ENST00000517134 104 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 CYP4A27P-201ENST00000567218 190 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 MIR3923-201ENST00000579521 83 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 AC010928.2-201ENST00000588017 287 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 AC006157.1-201ENST00000611750 366 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 AC009831.4-201ENST00000620744 325 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.41□□□□□ -2.02
CLCN3P51790 AL606534.2-204ENST00000635008 178 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLCN3P51790 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.41□□□□□ -2.02
CLCN3P51790 Z82209.1-201ENST00000422141 2135 ntBASIC2.41□□□□□ -2.02
CLCN3P51790 RNU4-15P-201ENST00000362613 141 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 Y_RNA.364-201ENST00000365532 101 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 RNU6-968P-201ENST00000384076 107 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 RNU6-1072P-201ENST00000384703 107 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 RNU6-443P-201ENST00000384780 107 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 MIR561-201ENST00000385216 97 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 RNA5SP201-201ENST00000410316 124 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 HMGB3P2-201ENST00000411913 584 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 RPS26P42-201ENST00000413485 326 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 AC012306.1-201ENST00000423267 114 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 CBX3P6-201ENST00000430257 527 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.4□□□□□ -2.03
CLCN3P51790 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCN3P51790 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 RNA5SP402-201ENST00000517148 110 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 Y_RNA.720-201ENST00000517166 92 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 AC023442.1-201ENST00000531247 422 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 MRPS36P4-201ENST00000534436 298 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.4□□□□□ -2.03
CLCN3P51790 AC004584.2-201ENST00000570407 410 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 AL078605.1-201ENST00000603529 500 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 Z98751.3-201ENST00000604447 521 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 AL355297.2-201ENST00000604792 129 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 AC137590.2-201ENST00000619709 240 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 SCARNA4-201ENST00000629045 128 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
CLCN3P51790 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CLCN3P51790 AC005592.1-201ENST00000566527 1640 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 snoU2_19.1-201ENST00000362361 80 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 RNU5B-2P-201ENST00000363036 113 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 SNORA29-201ENST00000384183 140 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 RNU6-1274P-201ENST00000384557 107 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 SNORA12.2-201ENST00000391040 156 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 MIR1289-2-201ENST00000408360 111 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 RNA5SP494-201ENST00000410653 129 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 MTCYBP10-201ENST00000424905 650 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLCN3P51790 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCN3P51790 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 RPL23AP50-201ENST00000434149 455 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 MTND5P22-201ENST00000458380 195 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 RNU7-26P-201ENST00000458980 63 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 Y_RNA.661-201ENST00000516003 99 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms