Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC022441.3-201ENST00000605737 136 ntBASIC1.89□□□□□ -2.11
ATRXP46100 AL159153.1-201ENST00000619688 317 ntBASIC1.89□□□□□ -2.11
ATRXP46100 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.89□□□□□ -2.11
ATRXP46100 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.89□□□□□ -2.11
ATRXP46100 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ATRXP46100 Y_RNA.148-201ENST00000363557 117 ntBASIC1.89□□□□□ -2.11
ATRXP46100 Y_RNA.274-201ENST00000364714 101 ntBASIC1.89□□□□□ -2.11
ATRXP46100 SNORD6-201ENST00000365444 73 ntBASIC1.89□□□□□ -2.11
ATRXP46100 RNU6-214P-201ENST00000384130 107 ntBASIC1.89□□□□□ -2.11
ATRXP46100 Y_RNA.482-201ENST00000384377 111 ntBASIC1.89□□□□□ -2.11
ATRXP46100 AL358176.2-201ENST00000425769 204 ntBASIC1.89□□□□□ -2.11
ATRXP46100 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.89□□□□□ -2.11
ATRXP46100 AL590383.1-201ENST00000428602 75 ntBASIC1.89□□□□□ -2.11
ATRXP46100 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.89□□□□□ -2.11
ATRXP46100 RNY3P15-201ENST00000516297 97 ntBASIC1.89□□□□□ -2.11
ATRXP46100 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.89□□□□□ -2.11
ATRXP46100 RNU6-91P-201ENST00000607774 107 ntBASIC1.89□□□□□ -2.11
ATRXP46100 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.88□□□□□ -2.11
ATRXP46100 Y_RNA.364-201ENST00000365532 101 ntBASIC1.88□□□□□ -2.11
ATRXP46100 FTH1P15-201ENST00000406984 280 ntBASIC1.88□□□□□ -2.11
ATRXP46100 AC074117.2-201ENST00000417130 397 ntBASIC1.88□□□□□ -2.11
ATRXP46100 RPS15AP6-201ENST00000420703 385 ntBASIC1.88□□□□□ -2.11
ATRXP46100 EIF4EP2-201ENST00000422816 654 ntBASIC1.88□□□□□ -2.11
ATRXP46100 USMG5P1-201ENST00000425964 177 ntBASIC1.88□□□□□ -2.11
ATRXP46100 AC112492.4-201ENST00000456549 352 ntBASIC1.88□□□□□ -2.11
ATRXP46100 U8.21-201ENST00000459536 136 ntBASIC1.88□□□□□ -2.11
ATRXP46100 RPL37P6-201ENST00000460682 294 ntBASIC1.88□□□□□ -2.11
ATRXP46100 MTATP8P1-201ENST00000467115 207 ntBASIC1.88□□□□□ -2.11
ATRXP46100 RPS26P21-201ENST00000475397 348 ntBASIC1.88□□□□□ -2.11
ATRXP46100 RPL22P13-201ENST00000493291 347 ntBASIC1.88□□□□□ -2.11
ATRXP46100 Y_RNA.668-201ENST00000516233 93 ntBASIC1.88□□□□□ -2.11
ATRXP46100 MIR3609-201ENST00000582661 80 ntBASIC1.88□□□□□ -2.11
ATRXP46100 MIR3149-201ENST00000584629 83 ntBASIC1.88□□□□□ -2.11
ATRXP46100 HSPE1P7-201ENST00000604681 321 ntBASIC1.88□□□□□ -2.11
ATRXP46100 AL080274.1-201ENST00000605565 220 ntBASIC1.88□□□□□ -2.11
ATRXP46100 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.88□□□□□ -2.11
ATRXP46100 AC091812.1-201ENST00000432235 1948 ntBASIC1.88□□□□□ -2.11
ATRXP46100 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ATRXP46100 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.88□□□□□ -2.11
ATRXP46100 RNA5SP139-201ENST00000364340 117 ntBASIC1.88□□□□□ -2.11
ATRXP46100 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.88□□□□□ -2.11
ATRXP46100 HMGB3P2-201ENST00000411913 584 ntBASIC1.88□□□□□ -2.11
ATRXP46100 NDUFS5P4-201ENST00000412983 318 ntBASIC1.88□□□□□ -2.11
ATRXP46100 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.88□□□□□ -2.11
ATRXP46100 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ATRXP46100 MTND5P22-201ENST00000458380 195 ntBASIC1.88□□□□□ -2.11
ATRXP46100 AC116655.1-201ENST00000508324 901 ntBASIC1.88□□□□□ -2.11
ATRXP46100 RNU7-175P-201ENST00000515915 61 ntBASIC1.88□□□□□ -2.11
ATRXP46100 AC036111.3-201ENST00000526389 112 ntBASIC1.88□□□□□ -2.11
ATRXP46100 IMMP1LP2-201ENST00000552954 492 ntBASIC1.88□□□□□ -2.11
ATRXP46100 AC125232.2-201ENST00000592457 143 ntBASIC1.88□□□□□ -2.11
ATRXP46100 PISRT1.1-201ENST00000616930 107 ntBASIC1.88□□□□□ -2.11
ATRXP46100 MIR6134-201ENST00000617606 109 ntBASIC1.88□□□□□ -2.11
ATRXP46100 U2.1-201ENST00000618978 145 ntBASIC1.88□□□□□ -2.11
ATRXP46100 AC007792.1-201ENST00000623023 402 ntBASIC1.88□□□□□ -2.11
ATRXP46100 AC022513.1-201ENST00000624512 117 ntBASIC1.88□□□□□ -2.11
ATRXP46100 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.88□□□□□ -2.11
ATRXP46100 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.88□□□□□ -2.11
ATRXP46100 MIR1302-1-201ENST00000637932 143 ntBASIC1.88□□□□□ -2.11
ATRXP46100 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.87□□□□□ -2.11
ATRXP46100 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.87□□□□□ -2.11
ATRXP46100 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.87□□□□□ -2.11
ATRXP46100 RNU6-270P-201ENST00000364131 105 ntBASIC1.87□□□□□ -2.11
ATRXP46100 SNORD14B-201ENST00000364533 90 ntBASIC1.87□□□□□ -2.11
ATRXP46100 U3.13-201ENST00000364804 214 ntBASIC1.87□□□□□ -2.11
ATRXP46100 RNU6-472P-201ENST00000384299 107 ntBASIC1.87□□□□□ -2.11
ATRXP46100 Y_RNA.574-201ENST00000384766 95 ntBASIC1.87□□□□□ -2.11
ATRXP46100 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.87□□□□□ -2.11
ATRXP46100 AC243964.1-201ENST00000441814 261 ntBASIC1.87□□□□□ -2.11
ATRXP46100 AK3P2-201ENST00000507976 429 ntBASIC1.87□□□□□ -2.11
ATRXP46100 RNU2-44P-201ENST00000516795 194 ntBASIC1.87□□□□□ -2.11
ATRXP46100 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.87□□□□□ -2.11
ATRXP46100 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.87□□□□□ -2.11
ATRXP46100 U6.99-201ENST00000637524 83 ntBASIC1.87□□□□□ -2.11
ATRXP46100 CDC27P3-201ENST00000635418 1910 ntBASIC1.87□□□□□ -2.11
ATRXP46100 ZNF204P-201ENST00000416749 2397 ntBASIC1.87□□□□□ -2.11
ATRXP46100 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ATRXP46100 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.87□□□□□ -2.11
ATRXP46100 MTND5P27-201ENST00000428871 1720 ntBASIC1.87□□□□□ -2.11
ATRXP46100 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
ATRXP46100 AC110774.1-201ENST00000623567 2018 ntBASIC1.87□□□□□ -2.11
ATRXP46100 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
ATRXP46100 RNU6-799P-201ENST00000363567 107 ntBASIC1.86□□□□□ -2.11
ATRXP46100 SNORD27-201ENST00000363981 72 ntBASIC1.86□□□□□ -2.11
ATRXP46100 RNU6-541P-201ENST00000384709 110 ntBASIC1.86□□□□□ -2.11
ATRXP46100 MIR544A-201ENST00000384855 91 ntBASIC1.86□□□□□ -2.11
ATRXP46100 MIR3074-201ENST00000384885 81 ntBASIC1.86□□□□□ -2.11
ATRXP46100 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.86□□□□□ -2.11
ATRXP46100 RPL23AP95-201ENST00000426806 265 ntBASIC1.86□□□□□ -2.11
ATRXP46100 HMGB1P12-201ENST00000438594 598 ntBASIC1.86□□□□□ -2.11
ATRXP46100 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.86□□□□□ -2.11
ATRXP46100 SNORA40.9-201ENST00000515895 93 ntBASIC1.86□□□□□ -2.11
ATRXP46100 RNU6-1231P-201ENST00000517185 103 ntBASIC1.86□□□□□ -2.11
ATRXP46100 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.86□□□□□ -2.11
ATRXP46100 AC007375.1-201ENST00000554513 578 ntBASIC1.86□□□□□ -2.11
ATRXP46100 HMGB1P14-201ENST00000557424 591 ntBASIC1.86□□□□□ -2.11
ATRXP46100 FAM106DP-201ENST00000586416 501 ntBASIC1.86□□□□□ -2.11
ATRXP46100 AC124312.5-201ENST00000604451 268 ntBASIC1.86□□□□□ -2.11
ATRXP46100 AL450472.1-202ENST00000637286 180 ntBASIC1.86□□□□□ -2.11
ATRXP46100 Y_RNA.115-201ENST00000363272 98 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms