Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AL161935.2-201ENST00000414627 60 ntBASIC0.84□□□□□ -2.27
COL18A1P39060 AC012306.1-201ENST00000423267 114 ntBASIC0.84□□□□□ -2.27
COL18A1P39060 AC099677.2-201ENST00000436385 175 ntBASIC0.84□□□□□ -2.27
COL18A1P39060 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.84□□□□□ -2.27
COL18A1P39060 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.84□□□□□ -2.27
COL18A1P39060 RNU7-125P-201ENST00000458760 62 ntBASIC0.84□□□□□ -2.27
COL18A1P39060 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.84□□□□□ -2.27
COL18A1P39060 AP003484.1-201ENST00000530974 250 ntBASIC0.84□□□□□ -2.27
COL18A1P39060 MIR3937-201ENST00000580135 106 ntBASIC0.84□□□□□ -2.27
COL18A1P39060 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.84□□□□□ -2.27
COL18A1P39060 MIR548AB-201ENST00000584917 84 ntBASIC0.84□□□□□ -2.27
COL18A1P39060 MIR8065-201ENST00000620577 100 ntBASIC0.84□□□□□ -2.27
COL18A1P39060 AC079248.2-201ENST00000623779 326 ntBASIC0.84□□□□□ -2.27
COL18A1P39060 RNU1-96P-201ENST00000364163 162 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 Y_RNA.504-201ENST00000384481 104 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 MIR300-201ENST00000401138 83 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.83□□□□□ -2.28
COL18A1P39060 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.83□□□□□ -2.28
COL18A1P39060 snoU13.30-201ENST00000458951 104 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.83□□□□□ -2.28
COL18A1P39060 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 MTND1P22-201ENST00000510572 951 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 RNU2-69P-201ENST00000516061 100 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.83□□□□□ -2.28
COL18A1P39060 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.83□□□□□ -2.28
COL18A1P39060 AP001836.1-201ENST00000604675 523 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 AC136475.10-201ENST00000620253 385 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 AF246928.1-201ENST00000623768 87 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 AC009161.2-201ENST00000624626 138 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
COL18A1P39060 RNU6-562P-201ENST00000362731 107 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 RNU6-827P-201ENST00000365553 106 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 RNU6-456P-201ENST00000384493 107 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 EIF1P1-201ENST00000421436 341 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.83□□□□□ -2.28
COL18A1P39060 AL031274.1-201ENST00000450334 232 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 MTCO2P6-201ENST00000463134 685 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 AL163195.1-201ENST00000496941 348 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 AC098862.1-201ENST00000504991 413 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 RNU6-948P-201ENST00000516374 107 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 MIR4703-201ENST00000577728 79 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 AC009994.1-201ENST00000606889 253 ntBASIC0.83□□□□□ -2.28
COL18A1P39060 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
COL18A1P39060 MIR302D-201ENST00000362275 68 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 RNU6-1303P-201ENST00000364841 107 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 Y_RNA.399-201ENST00000383955 105 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 Y_RNA.412-201ENST00000384001 104 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 RNU6-1127P-201ENST00000384580 107 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 RNU6-606P-201ENST00000384721 111 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 BX295541.1-201ENST00000417774 250 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 AL117339.3-201ENST00000418733 162 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 CYCSP46-201ENST00000423569 204 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.82□□□□□ -2.28
COL18A1P39060 RPS27P16-201ENST00000425758 201 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.82□□□□□ -2.28
COL18A1P39060 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.82□□□□□ -2.28
COL18A1P39060 Z98751.3-201ENST00000604447 521 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 MIR3976-201ENST00000606807 139 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.82□□□□□ -2.28
COL18A1P39060 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 AL359697.1-201ENST00000624879 587 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 AL450472.1-202ENST00000637286 180 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 ELL2P3-201ENST00000457883 1602 ntBASIC0.82□□□□□ -2.28
COL18A1P39060 RNU6-181P-201ENST00000363225 107 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 SNORA63D-201ENST00000364359 132 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 AC245047.4-201ENST00000433189 144 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 RPS29P15-201ENST00000458329 171 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 snoU13.27-201ENST00000459278 104 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.81□□□□□ -2.28
COL18A1P39060 RNU6-1041P-201ENST00000516254 102 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 RNU6-1146P-201ENST00000516282 102 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 RNU6-445P-201ENST00000516949 107 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 RNU6-232P-201ENST00000517144 64 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
COL18A1P39060 MTCO3P23-201ENST00000561363 289 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 AC008147.4-201ENST00000617570 1204 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 AC072046.2-201ENST00000618366 268 ntBASIC0.81□□□□□ -2.28
COL18A1P39060 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
COL18A1P39060 RNU6-545P-201ENST00000362681 104 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 RNU1-76P-201ENST00000362903 159 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 Y_RNA.280-201ENST00000364765 112 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 Y_RNA.390-201ENST00000383932 102 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 RNU6-418P-201ENST00000384035 107 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 MIR194-1-201ENST00000384892 85 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 SNORA16.2-201ENST00000390991 127 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 RNU6-1093P-201ENST00000391194 107 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 MIR208B-201ENST00000401172 77 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 RNA5SP511-201ENST00000410487 115 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 COX6CP10-201ENST00000416832 224 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.8□□□□□ -2.28
COL18A1P39060 SNX2P2-201ENST00000424553 323 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.8□□□□□ -2.28
COL18A1P39060 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.8□□□□□ -2.28
COL18A1P39060 AC073910.1-201ENST00000445047 438 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 OR2AQ1P-201ENST00000451972 200 ntBASIC0.8□□□□□ -2.28
COL18A1P39060 AC010531.2-201ENST00000465012 153 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms