Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC139712.2-201ENST00000424302 339 ntBASIC3.07□□□□□ -1.92
XPAP23025 AC027124.2-201ENST00000428249 105 ntBASIC3.07□□□□□ -1.92
XPAP23025 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.07□□□□□ -1.92
XPAP23025 Y_RNA.683-201ENST00000516508 93 ntBASIC3.07□□□□□ -1.92
XPAP23025 SCARNA24.2-201ENST00000516968 130 ntBASIC3.07□□□□□ -1.92
XPAP23025 AC104027.1-201ENST00000521887 300 ntBASIC3.07□□□□□ -1.92
XPAP23025 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.07□□□□□ -1.92
XPAP23025 EIF4A1P12-201ENST00000551910 141 ntBASIC3.07□□□□□ -1.92
XPAP23025 MIR4423-201ENST00000580922 80 ntBASIC3.07□□□□□ -1.92
XPAP23025 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.07□□□□□ -1.92
XPAP23025 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.07□□□□□ -1.92
XPAP23025 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
XPAP23025 MIR7515-201ENST00000637837 67 ntBASIC3.07□□□□□ -1.92
XPAP23025 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.07□□□□□ -1.92
XPAP23025 AC135776.4-201ENST00000624300 1904 ntBASIC3.07□□□□□ -1.92
XPAP23025 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
XPAP23025 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
XPAP23025 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.06□□□□□ -1.92
XPAP23025 SNORD56.3-201ENST00000363507 71 ntBASIC3.06□□□□□ -1.92
XPAP23025 U3.9-201ENST00000363823 204 ntBASIC3.06□□□□□ -1.92
XPAP23025 SNORA18.2-201ENST00000383865 132 ntBASIC3.06□□□□□ -1.92
XPAP23025 RNU6-793P-201ENST00000384233 104 ntBASIC3.06□□□□□ -1.92
XPAP23025 RNU6-1026P-201ENST00000384465 108 ntBASIC3.06□□□□□ -1.92
XPAP23025 RNA5SP274-201ENST00000410484 108 ntBASIC3.06□□□□□ -1.92
XPAP23025 ELOCP21-201ENST00000412558 336 ntBASIC3.06□□□□□ -1.92
XPAP23025 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.06□□□□□ -1.92
XPAP23025 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.06□□□□□ -1.92
XPAP23025 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.06□□□□□ -1.92
XPAP23025 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.06□□□□□ -1.92
XPAP23025 HMGB3P17-201ENST00000504195 649 ntBASIC3.06□□□□□ -1.92
XPAP23025 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.06□□□□□ -1.92
XPAP23025 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.06□□□□□ -1.92
XPAP23025 RNA5SP385-201ENST00000515947 110 ntBASIC3.06□□□□□ -1.92
XPAP23025 RNU6-966P-201ENST00000516479 104 ntBASIC3.06□□□□□ -1.92
XPAP23025 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.06□□□□□ -1.92
XPAP23025 RPL30P11-203ENST00000598995 310 ntBASIC3.06□□□□□ -1.92
XPAP23025 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
XPAP23025 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
XPAP23025 AC069528.2-201ENST00000624849 1991 ntBASIC3.05□□□□□ -1.92
XPAP23025 RNU1-72P-201ENST00000362976 153 ntBASIC3.05□□□□□ -1.92
XPAP23025 RNU6-461P-201ENST00000364195 107 ntBASIC3.05□□□□□ -1.92
XPAP23025 RNU6-245P-201ENST00000384020 107 ntBASIC3.05□□□□□ -1.92
XPAP23025 Y_RNA.462-201ENST00000384268 102 ntBASIC3.05□□□□□ -1.92
XPAP23025 MT-TR-201ENST00000387439 65 ntBASIC3.05□□□□□ -1.92
XPAP23025 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
XPAP23025 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.05□□□□□ -1.92
XPAP23025 IFNA11P-201ENST00000446352 526 ntBASIC3.05□□□□□ -1.92
XPAP23025 AC007395.1-201ENST00000451333 677 ntBASIC3.05□□□□□ -1.92
XPAP23025 RPL23AP3-201ENST00000453844 468 ntBASIC3.05□□□□□ -1.92
XPAP23025 AC140059.1-201ENST00000489238 361 ntBASIC3.05□□□□□ -1.92
XPAP23025 RNU6-1023P-201ENST00000516137 106 ntBASIC3.05□□□□□ -1.92
XPAP23025 SCARNA20.6-201ENST00000517251 106 ntBASIC3.05□□□□□ -1.92
XPAP23025 HSPE1P18-201ENST00000517602 280 ntBASIC3.05□□□□□ -1.92
XPAP23025 AC068657.1-201ENST00000520807 306 ntBASIC3.05□□□□□ -1.92
XPAP23025 AC018448.1-201ENST00000552843 316 ntBASIC3.05□□□□□ -1.92
XPAP23025 AL356575.1-201ENST00000603008 283 ntBASIC3.05□□□□□ -1.92
XPAP23025 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
XPAP23025 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.05□□□□□ -1.92
XPAP23025 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
XPAP23025 MIR335-201ENST00000362173 94 ntBASIC3.04□□□□□ -1.92
XPAP23025 SNORD81.1-201ENST00000363064 77 ntBASIC3.04□□□□□ -1.92
XPAP23025 SNORD27-201ENST00000363981 72 ntBASIC3.04□□□□□ -1.92
XPAP23025 Y_RNA.257-201ENST00000364596 102 ntBASIC3.04□□□□□ -1.92
XPAP23025 Y_RNA.415-201ENST00000384012 112 ntBASIC3.04□□□□□ -1.92
XPAP23025 Y_RNA.539-201ENST00000384635 107 ntBASIC3.04□□□□□ -1.92
XPAP23025 Y_RNA.570-201ENST00000384750 101 ntBASIC3.04□□□□□ -1.92
XPAP23025 AL033519.2-201ENST00000403958 392 ntBASIC3.04□□□□□ -1.92
XPAP23025 AC009969.1-201ENST00000438726 172 ntBASIC3.04□□□□□ -1.92
XPAP23025 UQCRBP2-201ENST00000447827 297 ntBASIC3.04□□□□□ -1.92
XPAP23025 RNU1-143P-201ENST00000516296 146 ntBASIC3.04□□□□□ -1.92
XPAP23025 RNU7-110P-201ENST00000516891 62 ntBASIC3.04□□□□□ -1.92
XPAP23025 AP002001.1-203ENST00000534002 267 ntBASIC3.04□□□□□ -1.92
XPAP23025 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
XPAP23025 AK6P2-201ENST00000549020 471 ntBASIC3.04□□□□□ -1.92
XPAP23025 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.04□□□□□ -1.92
XPAP23025 AC233702.2-202ENST00000562547 291 ntBASIC3.04□□□□□ -1.92
XPAP23025 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.04□□□□□ -1.92
XPAP23025 SNRPGP20-201ENST00000604477 205 ntBASIC3.04□□□□□ -1.92
XPAP23025 U1.23-201ENST00000610293 146 ntBASIC3.04□□□□□ -1.92
XPAP23025 RNU1-68P-201ENST00000615382 146 ntBASIC3.04□□□□□ -1.92
XPAP23025 AL449363.1-201ENST00000617815 186 ntBASIC3.04□□□□□ -1.92
XPAP23025 U1.39-201ENST00000621562 146 ntBASIC3.04□□□□□ -1.92
XPAP23025 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.04□□□□□ -1.92
XPAP23025 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.03□□□□□ -1.92
XPAP23025 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
XPAP23025 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
XPAP23025 SNORA20.1-201ENST00000364790 130 ntBASIC3.03□□□□□ -1.92
XPAP23025 RNU6-1175P-201ENST00000365200 107 ntBASIC3.03□□□□□ -1.92
XPAP23025 SNORA18.3-201ENST00000384122 132 ntBASIC3.03□□□□□ -1.92
XPAP23025 AC004386.2-201ENST00000441858 148 ntBASIC3.03□□□□□ -1.92
XPAP23025 RNU6-625P-201ENST00000459412 107 ntBASIC3.03□□□□□ -1.92
XPAP23025 S100A11P2-201ENST00000467589 312 ntBASIC3.03□□□□□ -1.92
XPAP23025 AC117440.1-201ENST00000474107 571 ntBASIC3.03□□□□□ -1.92
XPAP23025 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.03□□□□□ -1.92
XPAP23025 SCGB1D5P-201ENST00000515134 247 ntBASIC3.03□□□□□ -1.92
XPAP23025 RNA5SP112-201ENST00000515937 99 ntBASIC3.03□□□□□ -1.92
XPAP23025 RPPH1-2P-201ENST00000516688 293 ntBASIC3.03□□□□□ -1.92
XPAP23025 RNU6-111P-201ENST00000517179 105 ntBASIC3.03□□□□□ -1.92
XPAP23025 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.03□□□□□ -1.92
XPAP23025 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms