Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC107952.2-201ENST00000606048 486 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 AL096861.1-201ENST00000610899 123 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 AC017104.5-201ENST00000637647 639 ntBASIC-1.7□□□□□ -2.68
TOP2AP11388 CBX3P9-201ENST00000402326 552 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 MTCO1P5-201ENST00000433573 344 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 MTATP6P30-201ENST00000443540 664 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 MTCO3P27-201ENST00000514397 196 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 RNU6-706P-201ENST00000517229 104 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-1.71□□□□□ -2.68
TOP2AP11388 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.71□□□□□ -2.68
TOP2AP11388 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-1.71□□□□□ -2.68
TOP2AP11388 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.71□□□□□ -2.68
TOP2AP11388 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 ACA59.2-201ENST00000517061 156 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 AL929325.1-201ENST00000603096 117 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 Z99289.3-201ENST00000605586 594 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 AC090186.1-201ENST00000605991 572 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.71□□□□□ -2.68
TOP2AP11388 RNU6-529P-201ENST00000363383 104 ntBASIC-1.72□□□□□ -2.69
TOP2AP11388 AC244250.2-201ENST00000418731 148 ntBASIC-1.72□□□□□ -2.69
TOP2AP11388 snoU109.2-201ENST00000459316 135 ntBASIC-1.72□□□□□ -2.69
TOP2AP11388 SRRM1P2-201ENST00000464531 1192 ntBASIC-1.72□□□□□ -2.69
TOP2AP11388 RNA5SP169-201ENST00000517268 117 ntBASIC-1.72□□□□□ -2.69
TOP2AP11388 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.72□□□□□ -2.69
TOP2AP11388 RNY4P6-201ENST00000363667 96 ntBASIC-1.73□□□□□ -2.69
TOP2AP11388 AC119618.1-201ENST00000434191 222 ntBASIC-1.73□□□□□ -2.69
TOP2AP11388 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.73□□□□□ -2.69
TOP2AP11388 RNA5SP290-201ENST00000517133 127 ntBASIC-1.73□□□□□ -2.69
TOP2AP11388 RNA5SP66-201ENST00000517178 101 ntBASIC-1.73□□□□□ -2.69
TOP2AP11388 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.73□□□□□ -2.69
TOP2AP11388 AC006441.5-201ENST00000612680 209 ntBASIC-1.73□□□□□ -2.69
TOP2AP11388 AL603839.4-201ENST00000624658 1005 ntBASIC-1.73□□□□□ -2.69
TOP2AP11388 SCARNA4-201ENST00000629045 128 ntBASIC-1.73□□□□□ -2.69
TOP2AP11388 RNU6-369P-201ENST00000362515 102 ntBASIC-1.74□□□□□ -2.69
TOP2AP11388 RNU4-36P-201ENST00000364294 144 ntBASIC-1.74□□□□□ -2.69
TOP2AP11388 MIR1303-201ENST00000408625 86 ntBASIC-1.74□□□□□ -2.69
TOP2AP11388 AL133396.1-201ENST00000432048 687 ntBASIC-1.74□□□□□ -2.69
TOP2AP11388 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-1.74□□□□□ -2.69
TOP2AP11388 TPT1P7-201ENST00000458300 517 ntBASIC-1.74□□□□□ -2.69
TOP2AP11388 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.74□□□□□ -2.69
TOP2AP11388 RNU6-158P-201ENST00000517104 100 ntBASIC-1.74□□□□□ -2.69
TOP2AP11388 AP001429.1-201ENST00000602568 530 ntBASIC-1.74□□□□□ -2.69
TOP2AP11388 AC010809.3-201ENST00000621310 641 ntBASIC-1.74□□□□□ -2.69
TOP2AP11388 MIR148A-201ENST00000362215 68 ntBASIC-1.75□□□□□ -2.69
TOP2AP11388 RPS20P2-201ENST00000402520 389 ntBASIC-1.75□□□□□ -2.69
TOP2AP11388 SNORD100-201ENST00000408573 76 ntBASIC-1.75□□□□□ -2.69
TOP2AP11388 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.75□□□□□ -2.69
TOP2AP11388 AC023512.1-201ENST00000444513 499 ntBASIC-1.75□□□□□ -2.69
TOP2AP11388 AL500527.2-201ENST00000454105 95 ntBASIC-1.75□□□□□ -2.69
TOP2AP11388 RNU6-977P-201ENST00000516411 103 ntBASIC-1.75□□□□□ -2.69
TOP2AP11388 UBE2Q2P8-201ENST00000560644 102 ntBASIC-1.75□□□□□ -2.69
TOP2AP11388 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.75□□□□□ -2.69
TOP2AP11388 MIR340-201ENST00000362125 95 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 RNU6-534P-201ENST00000364877 106 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 RNU6-1031P-201ENST00000384773 107 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 AC048346.1-201ENST00000510247 144 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 MTND2P7-201ENST00000521337 640 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 AL391840.1-201ENST00000571144 367 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 MIR3192-201ENST00000584920 77 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 MTND5P31-201ENST00000419366 1374 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 MIR186-201ENST00000384988 86 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 FCF1P10-201ENST00000407590 479 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 MIR1185-1-201ENST00000408598 86 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 Y_RNA.597-201ENST00000410463 100 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.76□□□□□ -2.69
TOP2AP11388 AC013828.1-201ENST00000481845 158 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 AC116655.1-201ENST00000508324 901 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 AC021146.9-201ENST00000512503 156 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.76□□□□□ -2.69
TOP2AP11388 RNU6-428P-201ENST00000362942 107 ntBASIC-1.77□□□□□ -2.69
TOP2AP11388 MIR204-201ENST00000385200 110 ntBASIC-1.77□□□□□ -2.69
TOP2AP11388 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.77□□□□□ -2.69
TOP2AP11388 FCF1P9-201ENST00000412546 282 ntBASIC-1.77□□□□□ -2.69
TOP2AP11388 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.77□□□□□ -2.69
TOP2AP11388 RPS23P5-201ENST00000495419 428 ntBASIC-1.77□□□□□ -2.69
TOP2AP11388 MIR3925-201ENST00000584674 77 ntBASIC-1.77□□□□□ -2.69
TOP2AP11388 MIR6507-201ENST00000613630 70 ntBASIC-1.77□□□□□ -2.69
TOP2AP11388 RNU6-199P-201ENST00000362954 107 ntBASIC-1.78□□□□□ -2.69
TOP2AP11388 MIR29B2-201ENST00000385055 81 ntBASIC-1.78□□□□□ -2.69
TOP2AP11388 RNU6-705P-201ENST00000410601 104 ntBASIC-1.78□□□□□ -2.69
TOP2AP11388 MTCO1P21-201ENST00000416634 589 ntBASIC-1.78□□□□□ -2.69
TOP2AP11388 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.78□□□□□ -2.69
TOP2AP11388 MED28P2-201ENST00000475771 317 ntBASIC-1.78□□□□□ -2.69
TOP2AP11388 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-1.78□□□□□ -2.69
TOP2AP11388 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-1.78□□□□□ -2.69
TOP2AP11388 MIR3152-201ENST00000579801 74 ntBASIC-1.78□□□□□ -2.69
TOP2AP11388 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.78□□□□□ -2.69
TOP2AP11388 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.78□□□□□ -2.69
TOP2AP11388 U6.99-201ENST00000637524 83 ntBASIC-1.78□□□□□ -2.69
TOP2AP11388 SNORA2.2-201ENST00000365473 135 ntBASIC-1.79□□□□□ -2.7
TOP2AP11388 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.79□□□□□ -2.7
TOP2AP11388 AC010154.1-201ENST00000425857 269 ntBASIC-1.79□□□□□ -2.7
TOP2AP11388 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.79□□□□□ -2.7
TOP2AP11388 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-1.8□□□□□ -2.7
TOP2AP11388 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.8□□□□□ -2.7
TOP2AP11388 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.8□□□□□ -2.7
TOP2AP11388 MIR7844-201ENST00000616161 122 ntBASIC-1.8□□□□□ -2.7
TOP2AP11388 RNU6-98P-201ENST00000384173 107 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 MTCO3P1-205ENST00000422088 832 ntBASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms