Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.67□□□□□ -2.14
TOP1P11387 AC093259.1-201ENST00000509755 300 ntBASIC1.67□□□□□ -2.14
TOP1P11387 RNU6-256P-201ENST00000516747 97 ntBASIC1.67□□□□□ -2.14
TOP1P11387 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.67□□□□□ -2.14
TOP1P11387 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.67□□□□□ -2.14
TOP1P11387 AC087441.2-201ENST00000529141 262 ntBASIC1.67□□□□□ -2.14
TOP1P11387 TRAV32-201ENST00000553993 340 ntBASIC1.67□□□□□ -2.14
TOP1P11387 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.67□□□□□ -2.14
TOP1P11387 CPDP1-201ENST00000579660 283 ntBASIC1.67□□□□□ -2.14
TOP1P11387 MIR4801-201ENST00000582704 82 ntBASIC1.67□□□□□ -2.14
TOP1P11387 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.67□□□□□ -2.14
TOP1P11387 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.67□□□□□ -2.14
TOP1P11387 MTND5P10-201ENST00000603719 1809 ntBASIC1.67□□□□□ -2.14
TOP1P11387 RNU6-527P-201ENST00000363425 104 ntBASIC1.66□□□□□ -2.14
TOP1P11387 RNU6-1285P-201ENST00000363480 105 ntBASIC1.66□□□□□ -2.14
TOP1P11387 Y_RNA.212-201ENST00000364177 102 ntBASIC1.66□□□□□ -2.14
TOP1P11387 SNORD32A-201ENST00000364805 84 ntBASIC1.66□□□□□ -2.14
TOP1P11387 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.66□□□□□ -2.14
TOP1P11387 SNORD116-11-201ENST00000383882 92 ntBASIC1.66□□□□□ -2.14
TOP1P11387 SNORA32.2-201ENST00000384049 122 ntBASIC1.66□□□□□ -2.14
TOP1P11387 MTCO3P46-201ENST00000425787 232 ntBASIC1.66□□□□□ -2.14
TOP1P11387 AL591043.1-201ENST00000432461 424 ntBASIC1.66□□□□□ -2.14
TOP1P11387 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.66□□□□□ -2.14
TOP1P11387 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.66□□□□□ -2.14
TOP1P11387 AL035666.1-201ENST00000446195 348 ntBASIC1.66□□□□□ -2.14
TOP1P11387 RPL30P12-201ENST00000474666 353 ntBASIC1.66□□□□□ -2.14
TOP1P11387 RPL30P1-201ENST00000488676 339 ntBASIC1.66□□□□□ -2.14
TOP1P11387 SNORA20.3-201ENST00000516880 132 ntBASIC1.66□□□□□ -2.14
TOP1P11387 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.66□□□□□ -2.14
TOP1P11387 SCOCP1-201ENST00000554676 349 ntBASIC1.66□□□□□ -2.14
TOP1P11387 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.66□□□□□ -2.14
TOP1P11387 AC023043.2-201ENST00000589678 1026 ntBASIC1.66□□□□□ -2.14
TOP1P11387 BNIP3P16-201ENST00000589779 534 ntBASIC1.66□□□□□ -2.14
TOP1P11387 VN1R107P-201ENST00000601784 209 ntBASIC1.66□□□□□ -2.14
TOP1P11387 AC099654.14-201ENST00000638599 341 ntBASIC1.66□□□□□ -2.14
TOP1P11387 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
TOP1P11387 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TOP1P11387 Y_RNA.88-201ENST00000363029 99 ntBASIC1.65□□□□□ -2.15
TOP1P11387 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.65□□□□□ -2.15
TOP1P11387 RNU6-95P-201ENST00000384697 107 ntBASIC1.65□□□□□ -2.15
TOP1P11387 MIR544A-201ENST00000384855 91 ntBASIC1.65□□□□□ -2.15
TOP1P11387 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
TOP1P11387 PDCL2P1-201ENST00000419302 352 ntBASIC1.65□□□□□ -2.15
TOP1P11387 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.65□□□□□ -2.15
TOP1P11387 Z82205.1-201ENST00000428456 297 ntBASIC1.65□□□□□ -2.15
TOP1P11387 AC092473.1-201ENST00000441098 221 ntBASIC1.65□□□□□ -2.15
TOP1P11387 AC009474.2-201ENST00000451383 136 ntBASIC1.65□□□□□ -2.15
TOP1P11387 RNU7-187P-201ENST00000458985 68 ntBASIC1.65□□□□□ -2.15
TOP1P11387 RPL31P58-201ENST00000469001 379 ntBASIC1.65□□□□□ -2.15
TOP1P11387 FO393415.2-201ENST00000480085 343 ntBASIC1.65□□□□□ -2.15
TOP1P11387 PRDX4P1-201ENST00000507189 574 ntBASIC1.65□□□□□ -2.15
TOP1P11387 AK3P2-201ENST00000507976 429 ntBASIC1.65□□□□□ -2.15
TOP1P11387 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.65□□□□□ -2.15
TOP1P11387 AC091874.1-201ENST00000511402 339 ntBASIC1.65□□□□□ -2.15
TOP1P11387 AC025465.4-201ENST00000513422 638 ntBASIC1.65□□□□□ -2.15
TOP1P11387 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.65□□□□□ -2.15
TOP1P11387 AC026371.1-201ENST00000551867 419 ntBASIC1.65□□□□□ -2.15
TOP1P11387 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.65□□□□□ -2.15
TOP1P11387 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.65□□□□□ -2.15
TOP1P11387 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.65□□□□□ -2.15
TOP1P11387 MIR4421-201ENST00000578133 69 ntBASIC1.65□□□□□ -2.15
TOP1P11387 MIR4742-201ENST00000581069 85 ntBASIC1.65□□□□□ -2.15
TOP1P11387 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.65□□□□□ -2.15
TOP1P11387 AC009033.1-201ENST00000624279 431 ntBASIC1.65□□□□□ -2.15
TOP1P11387 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.65□□□□□ -2.15
TOP1P11387 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TOP1P11387 Y_RNA.160-201ENST00000363677 92 ntBASIC1.64□□□□□ -2.15
TOP1P11387 RNU6-743P-201ENST00000364151 106 ntBASIC1.64□□□□□ -2.15
TOP1P11387 RNU6-1317P-201ENST00000364582 104 ntBASIC1.64□□□□□ -2.15
TOP1P11387 Y_RNA.338-201ENST00000365320 114 ntBASIC1.64□□□□□ -2.15
TOP1P11387 RNY3P14-201ENST00000384309 102 ntBASIC1.64□□□□□ -2.15
TOP1P11387 RNU6-876P-201ENST00000391295 104 ntBASIC1.64□□□□□ -2.15
TOP1P11387 RPL23AP36-201ENST00000413895 458 ntBASIC1.64□□□□□ -2.15
TOP1P11387 AC007098.1-201ENST00000420122 367 ntBASIC1.64□□□□□ -2.15
TOP1P11387 HMGB1P18-201ENST00000438801 619 ntBASIC1.64□□□□□ -2.15
TOP1P11387 SNRPGP13-201ENST00000442212 177 ntBASIC1.64□□□□□ -2.15
TOP1P11387 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.64□□□□□ -2.15
TOP1P11387 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.64□□□□□ -2.15
TOP1P11387 RPL39P29-201ENST00000447779 157 ntBASIC1.64□□□□□ -2.15
TOP1P11387 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.64□□□□□ -2.15
TOP1P11387 RNU6-1037P-201ENST00000459571 107 ntBASIC1.64□□□□□ -2.15
TOP1P11387 TRBVA-201ENST00000498804 316 ntBASIC1.64□□□□□ -2.15
TOP1P11387 HMGN1P12-201ENST00000499125 195 ntBASIC1.64□□□□□ -2.15
TOP1P11387 AC114801.2-201ENST00000503825 781 ntBASIC1.64□□□□□ -2.15
TOP1P11387 RNU1-92P-201ENST00000517017 135 ntBASIC1.64□□□□□ -2.15
TOP1P11387 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.64□□□□□ -2.15
TOP1P11387 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.64□□□□□ -2.15
TOP1P11387 AP001836.1-201ENST00000604675 523 ntBASIC1.64□□□□□ -2.15
TOP1P11387 RBM11P1-201ENST00000604951 799 ntBASIC1.64□□□□□ -2.15
TOP1P11387 AC016727.1-205ENST00000605437 569 ntBASIC1.64□□□□□ -2.15
TOP1P11387 AC022306.2-201ENST00000617563 647 ntBASIC1.64□□□□□ -2.15
TOP1P11387 AL450472.1-202ENST00000637286 180 ntBASIC1.64□□□□□ -2.15
TOP1P11387 snoU2_19.1-201ENST00000362361 80 ntBASIC1.63□□□□□ -2.15
TOP1P11387 RNU6-845P-201ENST00000362578 103 ntBASIC1.63□□□□□ -2.15
TOP1P11387 Y_RNA.72-201ENST00000362894 103 ntBASIC1.63□□□□□ -2.15
TOP1P11387 Y_RNA.151-201ENST00000363566 112 ntBASIC1.63□□□□□ -2.15
TOP1P11387 Y_RNA.339-201ENST00000365325 102 ntBASIC1.63□□□□□ -2.15
TOP1P11387 RNU6-128P-201ENST00000383976 107 ntBASIC1.63□□□□□ -2.15
TOP1P11387 RNU6-214P-201ENST00000384130 107 ntBASIC1.63□□□□□ -2.15
TOP1P11387 RNU6-43P-201ENST00000384302 107 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms