Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SNORD12-201ENST00000391002 90 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 AF228730.1-201ENST00000397972 663 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 AL355796.1-201ENST00000406706 323 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 MIR1912-201ENST00000410389 80 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 RNA5SP285-201ENST00000516619 119 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 Z98751.3-201ENST00000604447 521 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.22□□□□□ -2.37
FREM3P0C091 RPL17P51-201ENST00000605218 238 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 BCRP9-201ENST00000605312 388 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
FREM3P0C091 Y_RNA.363-201ENST00000365529 113 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 RNU6-793P-201ENST00000384233 104 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 SNORA80D-201ENST00000384488 135 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 RNU6-417P-201ENST00000384712 107 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.21□□□□□ -2.38
FREM3P0C091 HSFY7P-201ENST00000432672 318 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 HSFY8P-201ENST00000437934 318 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.21□□□□□ -2.38
FREM3P0C091 AC074290.1-201ENST00000448883 135 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.21□□□□□ -2.38
FREM3P0C091 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.21□□□□□ -2.38
FREM3P0C091 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.21□□□□□ -2.38
FREM3P0C091 MIR4307-201ENST00000582802 84 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.21□□□□□ -2.38
FREM3P0C091 AL513423.1-201ENST00000621695 132 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 AL359697.1-201ENST00000624879 587 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 AL138960.2-201ENST00000625145 535 ntBASIC0.21□□□□□ -2.38
FREM3P0C091 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.21□□□□□ -2.38
FREM3P0C091 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
FREM3P0C091 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
FREM3P0C091 Y_RNA.124-201ENST00000363339 93 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 Y_RNA.330-201ENST00000365230 109 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 RNU6-61P-201ENST00000365528 109 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 SNORD115.1-201ENST00000391109 76 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 MIR891A-201ENST00000401237 79 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 MIR1253-201ENST00000408273 105 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 RNU6-387P-201ENST00000411331 105 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.2□□□□□ -2.38
FREM3P0C091 AC114491.1-201ENST00000416095 246 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 C1DP2-201ENST00000418167 426 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 CETN4P-201ENST00000432407 469 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AL606489.2-201ENST00000433886 234 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.2□□□□□ -2.38
FREM3P0C091 MTND1P12-201ENST00000455231 147 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 C1DP4-201ENST00000455429 424 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.2□□□□□ -2.38
FREM3P0C091 AC016632.1-201ENST00000503994 196 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 MTND3P25-201ENST00000509243 135 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.2□□□□□ -2.38
FREM3P0C091 RNU6-685P-201ENST00000517088 95 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.2□□□□□ -2.38
FREM3P0C091 AP003327.1-201ENST00000529684 127 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AP002001.1-203ENST00000534002 267 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.2□□□□□ -2.38
FREM3P0C091 MIR4742-201ENST00000581069 85 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AC022217.4-201ENST00000604389 163 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 RNU1-76P-201ENST00000362903 159 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 SNORA36.2-201ENST00000384004 127 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 RNU6-692P-201ENST00000384496 107 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.2□□□□□ -2.38
FREM3P0C091 AC233266.1-201ENST00000454518 96 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 RNU7-94P-201ENST00000459576 63 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 RNU2-34P-201ENST00000516534 121 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 RNU6-201P-201ENST00000517100 61 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AC090049.2-201ENST00000550377 109 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AL139022.2-201ENST00000606934 443 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AC064807.4-201ENST00000607201 407 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AC242852.1-201ENST00000612151 96 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 PCGEM1.1-201ENST00000613431 131 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AP000484.1-201ENST00000620067 1252 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 AC244015.1-201ENST00000622301 99 ntBASIC0.2□□□□□ -2.38
FREM3P0C091 RNU6-1335P-201ENST00000365426 107 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 MIR300-201ENST00000401138 83 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 MRPS18CP6-201ENST00000423587 223 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 RPL22P17-201ENST00000438729 315 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 AC013470.1-201ENST00000453438 462 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 RNU7-21P-201ENST00000459430 62 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 AC106038.2-201ENST00000520706 568 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 MTATP6P15-201ENST00000527233 835 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.19□□□□□ -2.38
FREM3P0C091 AC016256.1-201ENST00000547971 354 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 TPRKBP2-201ENST00000565969 475 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 AC019226.2-201ENST00000625973 424 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 MIR6086-201ENST00000638065 55 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 Y_RNA.110-201ENST00000363220 99 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 MIR660-201ENST00000385235 97 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 ELOCP4-201ENST00000420090 333 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 FABP5P4-201ENST00000437203 171 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 RPEP5-201ENST00000441137 268 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 AC245047.8-201ENST00000456455 284 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 TRBVB-201ENST00000477100 408 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.19□□□□□ -2.38
FREM3P0C091 AC112187.2-201ENST00000604345 283 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 AL353765.1-201ENST00000605514 183 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 AL360219.1-201ENST00000610230 366 ntBASIC0.19□□□□□ -2.38
FREM3P0C091 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.19□□□□□ -2.38
FREM3P0C091 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.19□□□□□ -2.38
FREM3P0C091 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
FREM3P0C091 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms