Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
MMP1P03956 RNU6-1141P-201ENST00000364520 107 ntBASIC1.6□□□□□ -2.15
MMP1P03956 MIR1277-201ENST00000408536 78 ntBASIC1.6□□□□□ -2.15
MMP1P03956 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.6□□□□□ -2.15
MMP1P03956 MTCO3P18-201ENST00000440206 761 ntBASIC1.6□□□□□ -2.15
MMP1P03956 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.6□□□□□ -2.15
MMP1P03956 FO393415.2-201ENST00000480085 343 ntBASIC1.6□□□□□ -2.15
MMP1P03956 AC008628.2-201ENST00000502605 298 ntBASIC1.6□□□□□ -2.15
MMP1P03956 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.6□□□□□ -2.15
MMP1P03956 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.6□□□□□ -2.15
MMP1P03956 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.6□□□□□ -2.15
MMP1P03956 SNORA31.16-201ENST00000516773 139 ntBASIC1.6□□□□□ -2.15
MMP1P03956 MTND4LP26-201ENST00000518144 282 ntBASIC1.6□□□□□ -2.15
MMP1P03956 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.6□□□□□ -2.15
MMP1P03956 AP005660.1-201ENST00000522972 293 ntBASIC1.6□□□□□ -2.15
MMP1P03956 AC100830.2-201ENST00000581636 240 ntBASIC1.6□□□□□ -2.15
MMP1P03956 MIR4713-201ENST00000582691 75 ntBASIC1.6□□□□□ -2.15
MMP1P03956 MIR4452-201ENST00000583004 71 ntBASIC1.6□□□□□ -2.15
MMP1P03956 MIR3672-201ENST00000584290 82 ntBASIC1.6□□□□□ -2.15
MMP1P03956 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.6□□□□□ -2.15
MMP1P03956 AL022345.1-201ENST00000607292 135 ntBASIC1.6□□□□□ -2.15
MMP1P03956 AC002553.4-201ENST00000616896 331 ntBASIC1.6□□□□□ -2.15
MMP1P03956 AL353770.2-201ENST00000620024 78 ntBASIC1.6□□□□□ -2.15
MMP1P03956 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.6□□□□□ -2.15
MMP1P03956 RNU4-15P-201ENST00000362613 141 ntBASIC1.59□□□□□ -2.15
MMP1P03956 Y_RNA.135-201ENST00000363439 95 ntBASIC1.59□□□□□ -2.15
MMP1P03956 SNORD113-7-201ENST00000363762 77 ntBASIC1.59□□□□□ -2.15
MMP1P03956 Y_RNA.530-201ENST00000384587 101 ntBASIC1.59□□□□□ -2.15
MMP1P03956 SNORA26.3-201ENST00000391119 136 ntBASIC1.59□□□□□ -2.15
MMP1P03956 RNA5SP501-201ENST00000410990 112 ntBASIC1.59□□□□□ -2.15
MMP1P03956 RNU6-373P-201ENST00000411247 98 ntBASIC1.59□□□□□ -2.15
MMP1P03956 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.59□□□□□ -2.15
MMP1P03956 VN1R36P-201ENST00000414936 291 ntBASIC1.59□□□□□ -2.15
MMP1P03956 USP9YP28-201ENST00000435142 589 ntBASIC1.59□□□□□ -2.15
MMP1P03956 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.59□□□□□ -2.15
MMP1P03956 RNU6-1037P-201ENST00000459571 107 ntBASIC1.59□□□□□ -2.15
MMP1P03956 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.59□□□□□ -2.15
MMP1P03956 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
MMP1P03956 RNU6-1314P-201ENST00000517139 104 ntBASIC1.59□□□□□ -2.15
MMP1P03956 SCOCP1-201ENST00000554676 349 ntBASIC1.59□□□□□ -2.15
MMP1P03956 MIR3942-201ENST00000585264 109 ntBASIC1.59□□□□□ -2.15
MMP1P03956 CYP2C61P-201ENST00000604072 290 ntBASIC1.59□□□□□ -2.15
MMP1P03956 AL034555.1-201ENST00000604816 211 ntBASIC1.59□□□□□ -2.15
MMP1P03956 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
MMP1P03956 AL138726.1-201ENST00000614873 333 ntBASIC1.59□□□□□ -2.15
MMP1P03956 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.59□□□□□ -2.15
MMP1P03956 SNORD32B-201ENST00000364460 84 ntBASIC1.58□□□□□ -2.16
MMP1P03956 RNU6-1317P-201ENST00000364582 104 ntBASIC1.58□□□□□ -2.16
MMP1P03956 Y_RNA.414-201ENST00000384011 101 ntBASIC1.58□□□□□ -2.16
MMP1P03956 SNORA36A-201ENST00000384221 132 ntBASIC1.58□□□□□ -2.16
MMP1P03956 RNU6-831P-201ENST00000384548 107 ntBASIC1.58□□□□□ -2.16
MMP1P03956 Y_RNA.573-201ENST00000384763 105 ntBASIC1.58□□□□□ -2.16
MMP1P03956 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
MMP1P03956 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
MMP1P03956 AL033519.2-201ENST00000403958 392 ntBASIC1.58□□□□□ -2.16
MMP1P03956 RN7SKP61-201ENST00000410642 295 ntBASIC1.58□□□□□ -2.16
MMP1P03956 RN7SKP51-201ENST00000410781 304 ntBASIC1.58□□□□□ -2.16
MMP1P03956 RNU6-325P-201ENST00000411132 105 ntBASIC1.58□□□□□ -2.16
MMP1P03956 AC009310.1-201ENST00000414414 451 ntBASIC1.58□□□□□ -2.16
MMP1P03956 RPL30P16-201ENST00000419341 429 ntBASIC1.58□□□□□ -2.16
MMP1P03956 AL590632.1-201ENST00000424289 371 ntBASIC1.58□□□□□ -2.16
MMP1P03956 AL133396.1-201ENST00000432048 687 ntBASIC1.58□□□□□ -2.16
MMP1P03956 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.58□□□□□ -2.16
MMP1P03956 NFU1P2-201ENST00000448700 469 ntBASIC1.58□□□□□ -2.16
MMP1P03956 MTND1P11-201ENST00000456661 876 ntBASIC1.58□□□□□ -2.16
MMP1P03956 AC007547.1-201ENST00000462177 490 ntBASIC1.58□□□□□ -2.16
MMP1P03956 SNRPGP7-201ENST00000469016 106 ntBASIC1.58□□□□□ -2.16
MMP1P03956 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.58□□□□□ -2.16
MMP1P03956 AC025465.4-201ENST00000513422 638 ntBASIC1.58□□□□□ -2.16
MMP1P03956 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.58□□□□□ -2.16
MMP1P03956 RNU6-612P-201ENST00000516909 102 ntBASIC1.58□□□□□ -2.16
MMP1P03956 CPDP1-201ENST00000579660 283 ntBASIC1.58□□□□□ -2.16
MMP1P03956 MIR3136-201ENST00000583498 78 ntBASIC1.58□□□□□ -2.16
MMP1P03956 AP000654.2-201ENST00000605633 586 ntBASIC1.58□□□□□ -2.16
MMP1P03956 AC092794.1-201ENST00000612734 582 ntBASIC1.58□□□□□ -2.16
MMP1P03956 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.58□□□□□ -2.16
MMP1P03956 AC006504.8-201ENST00000621046 635 ntBASIC1.58□□□□□ -2.16
MMP1P03956 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.58□□□□□ -2.16
MMP1P03956 SNORD98-201ENST00000636377 67 ntBASIC1.58□□□□□ -2.16
MMP1P03956 AC100810.6-201ENST00000638068 285 ntBASIC1.58□□□□□ -2.16
MMP1P03956 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
MMP1P03956 MTND4P5-201ENST00000435821 1374 ntBASIC1.58□□□□□ -2.16
MMP1P03956 AP000560.1-201ENST00000624150 1937 ntBASIC1.58□□□□□ -2.16
MMP1P03956 Y_RNA.100-201ENST00000363141 102 ntBASIC1.57□□□□□ -2.16
MMP1P03956 Y_RNA.157-201ENST00000363638 102 ntBASIC1.57□□□□□ -2.16
MMP1P03956 RNU6-53P-201ENST00000365367 106 ntBASIC1.57□□□□□ -2.16
MMP1P03956 RNU6-142P-201ENST00000384019 107 ntBASIC1.57□□□□□ -2.16
MMP1P03956 RNU6-95P-201ENST00000384697 107 ntBASIC1.57□□□□□ -2.16
MMP1P03956 RNA5SP118-201ENST00000410385 109 ntBASIC1.57□□□□□ -2.16
MMP1P03956 AC244670.1-201ENST00000436879 112 ntBASIC1.57□□□□□ -2.16
MMP1P03956 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.57□□□□□ -2.16
MMP1P03956 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.57□□□□□ -2.16
MMP1P03956 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.57□□□□□ -2.16
MMP1P03956 RNU7-187P-201ENST00000458985 68 ntBASIC1.57□□□□□ -2.16
MMP1P03956 RPL9P9-202ENST00000466501 579 ntBASIC1.57□□□□□ -2.16
MMP1P03956 ATP5EP1-201ENST00000510257 156 ntBASIC1.57□□□□□ -2.16
MMP1P03956 RNU6-256P-201ENST00000516747 97 ntBASIC1.57□□□□□ -2.16
MMP1P03956 HSPE1P4-201ENST00000550617 308 ntBASIC1.57□□□□□ -2.16
MMP1P03956 AC078795.3-201ENST00000602913 472 ntBASIC1.57□□□□□ -2.16
MMP1P03956 AL356157.2-201ENST00000605122 111 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms