Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC005786.1-201ENST00000588553 154 ntBASIC2□□□□□ -2.09
GGPS1O95749 AC005296.1-201ENST00000616145 209 ntBASIC2□□□□□ -2.09
GGPS1O95749 AC137590.2-201ENST00000619709 240 ntBASIC2□□□□□ -2.09
GGPS1O95749 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2□□□□□ -2.09
GGPS1O95749 AC100810.6-201ENST00000638068 285 ntBASIC2□□□□□ -2.09
GGPS1O95749 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2□□□□□ -2.09
GGPS1O95749 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
GGPS1O95749 RNU6-1148P-201ENST00000410992 104 ntBASIC1.99□□□□□ -2.09
GGPS1O95749 AC009310.1-201ENST00000414414 451 ntBASIC1.99□□□□□ -2.09
GGPS1O95749 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.99□□□□□ -2.09
GGPS1O95749 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.99□□□□□ -2.09
GGPS1O95749 AC007395.1-201ENST00000451333 677 ntBASIC1.99□□□□□ -2.09
GGPS1O95749 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.99□□□□□ -2.09
GGPS1O95749 AC007215.1-201ENST00000464893 276 ntBASIC1.99□□□□□ -2.09
GGPS1O95749 RPL23AP75-201ENST00000491601 451 ntBASIC1.99□□□□□ -2.09
GGPS1O95749 MTCO2P30-201ENST00000503662 364 ntBASIC1.99□□□□□ -2.09
GGPS1O95749 AC011352.1-201ENST00000512300 793 ntBASIC1.99□□□□□ -2.09
GGPS1O95749 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.99□□□□□ -2.09
GGPS1O95749 POLR3GP2-201ENST00000588366 668 ntBASIC1.99□□□□□ -2.09
GGPS1O95749 SCARNA4-201ENST00000629045 128 ntBASIC1.99□□□□□ -2.09
GGPS1O95749 AC073869.6-201ENST00000640656 341 ntBASIC1.99□□□□□ -2.09
GGPS1O95749 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
GGPS1O95749 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
GGPS1O95749 MIR1277-201ENST00000408536 78 ntBASIC1.98□□□□□ -2.09
GGPS1O95749 AL358453.1-201ENST00000422522 250 ntBASIC1.98□□□□□ -2.09
GGPS1O95749 AC108667.1-201ENST00000428618 249 ntBASIC1.98□□□□□ -2.09
GGPS1O95749 MTCO1P44-201ENST00000441935 243 ntBASIC1.98□□□□□ -2.09
GGPS1O95749 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.98□□□□□ -2.09
GGPS1O95749 AC010531.2-201ENST00000465012 153 ntBASIC1.98□□□□□ -2.09
GGPS1O95749 RNU6-718P-201ENST00000516166 105 ntBASIC1.98□□□□□ -2.09
GGPS1O95749 RNVU1-2-201ENST00000516326 135 ntBASIC1.98□□□□□ -2.09
GGPS1O95749 RNU2-44P-201ENST00000516795 194 ntBASIC1.98□□□□□ -2.09
GGPS1O95749 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.98□□□□□ -2.09
GGPS1O95749 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.98□□□□□ -2.09
GGPS1O95749 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.98□□□□□ -2.09
GGPS1O95749 TCL6_2.1-201ENST00000615162 119 ntBASIC1.98□□□□□ -2.09
GGPS1O95749 AC022513.1-201ENST00000624512 117 ntBASIC1.98□□□□□ -2.09
GGPS1O95749 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.98□□□□□ -2.09
GGPS1O95749 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
GGPS1O95749 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
GGPS1O95749 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
GGPS1O95749 MIR300-201ENST00000401138 83 ntBASIC1.97□□□□□ -2.09
GGPS1O95749 Z82205.1-201ENST00000428456 297 ntBASIC1.97□□□□□ -2.09
GGPS1O95749 AC092989.1-201ENST00000481235 277 ntBASIC1.97□□□□□ -2.09
GGPS1O95749 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.97□□□□□ -2.09
GGPS1O95749 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.97□□□□□ -2.09
GGPS1O95749 GNAI2P1-201ENST00000541815 315 ntBASIC1.97□□□□□ -2.09
GGPS1O95749 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.97□□□□□ -2.09
GGPS1O95749 MIR4713-201ENST00000582691 75 ntBASIC1.97□□□□□ -2.09
GGPS1O95749 AC124303.1-201ENST00000605703 360 ntBASIC1.97□□□□□ -2.09
GGPS1O95749 AC019193.3-201ENST00000609144 554 ntBASIC1.97□□□□□ -2.09
GGPS1O95749 AL359697.1-201ENST00000624879 587 ntBASIC1.97□□□□□ -2.09
GGPS1O95749 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.97□□□□□ -2.09
GGPS1O95749 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
GGPS1O95749 MTND5P9-201ENST00000503854 1755 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 RNU6-457P-201ENST00000363999 107 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 RNU6-831P-201ENST00000384548 107 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 AL356432.1-201ENST00000405809 419 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.96□□□□□ -2.1
GGPS1O95749 AC004386.2-201ENST00000441858 148 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.96□□□□□ -2.1
GGPS1O95749 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.96□□□□□ -2.1
GGPS1O95749 AL357134.1-201ENST00000445848 426 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 RNA5SP57-201ENST00000459463 123 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.96□□□□□ -2.1
GGPS1O95749 ACA59.1-201ENST00000515966 143 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.96□□□□□ -2.1
GGPS1O95749 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.96□□□□□ -2.1
GGPS1O95749 MIR5006-201ENST00000583027 110 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 AP000907.4-201ENST00000604143 237 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.96□□□□□ -2.1
GGPS1O95749 AC006504.8-201ENST00000621046 635 ntBASIC1.96□□□□□ -2.1
GGPS1O95749 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.96□□□□□ -2.1
GGPS1O95749 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
GGPS1O95749 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.95□□□□□ -2.1
GGPS1O95749 RNU6-545P-201ENST00000362681 104 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 Y_RNA.132-201ENST00000363421 102 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 RNU6-1013P-201ENST00000384180 107 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 U8.10-201ENST00000384260 133 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 AL033519.2-201ENST00000403958 392 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 MIR1283-1-201ENST00000408494 87 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 RNA5SP100-201ENST00000410903 110 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 RNA5SP59-201ENST00000410922 110 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
GGPS1O95749 HMGB1P18-201ENST00000438801 619 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 AC009237.7-201ENST00000447357 229 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.95□□□□□ -2.1
GGPS1O95749 RN7SKP210-201ENST00000459176 261 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.95□□□□□ -2.1
GGPS1O95749 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.95□□□□□ -2.1
GGPS1O95749 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.95□□□□□ -2.1
GGPS1O95749 MIR4419B-201ENST00000577260 68 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.95□□□□□ -2.1
GGPS1O95749 AC068790.6-201ENST00000602558 258 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 AP003465.2-201ENST00000602571 373 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 SNRPGP20-201ENST00000604477 205 ntBASIC1.95□□□□□ -2.1
GGPS1O95749 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.95□□□□□ -2.1
GGPS1O95749 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms