Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 PCGEM1.1-201ENST00000613431 131 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.39□□□□□ -2.19
CTDNEP1O95476 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.39□□□□□ -2.19
CTDNEP1O95476 AC100810.6-201ENST00000638068 285 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CTDNEP1O95476 AC009541.1-201ENST00000438279 2662 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CTDNEP1O95476 AC092268.1-201ENST00000342691 405 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 RNU5B-2P-201ENST00000363036 113 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 SNORD115-3-201ENST00000363100 82 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 Y_RNA.151-201ENST00000363566 112 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 RNU6-1164P-201ENST00000364428 107 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 Y_RNA.414-201ENST00000384011 101 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 RNU6-214P-201ENST00000384130 107 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 RNU6-831P-201ENST00000384548 107 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 Y_RNA.530-201ENST00000384587 101 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 Y_RNA.599-201ENST00000410489 109 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 CBX3P6-201ENST00000430257 527 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.38□□□□□ -2.19
CTDNEP1O95476 AC093259.1-201ENST00000509755 300 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 RNU6-256P-201ENST00000516747 97 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 RNU6-1088P-201ENST00000516850 104 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 SNORA44.1-201ENST00000517031 108 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.38□□□□□ -2.19
CTDNEP1O95476 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.38□□□□□ -2.19
CTDNEP1O95476 AC080078.2-201ENST00000603766 501 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 MIR3976-201ENST00000606807 139 ntBASIC1.38□□□□□ -2.19
CTDNEP1O95476 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CTDNEP1O95476 Y_RNA.100-201ENST00000363141 102 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 Y_RNA.123-201ENST00000363338 102 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 Y_RNA.212-201ENST00000364177 102 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 RNU6-877P-201ENST00000383868 107 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 SNORA29-201ENST00000384183 140 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AC009310.1-201ENST00000414414 451 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.37□□□□□ -2.19
CTDNEP1O95476 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.37□□□□□ -2.19
CTDNEP1O95476 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.37□□□□□ -2.19
CTDNEP1O95476 RNA5SP57-201ENST00000459463 123 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AF186996.7-201ENST00000492781 209 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.37□□□□□ -2.19
CTDNEP1O95476 ATP5EP1-201ENST00000510257 156 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 RNU6-991P-201ENST00000516168 107 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 RNA5SP458-201ENST00000516188 119 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.37□□□□□ -2.19
CTDNEP1O95476 DEFB131C-201ENST00000528817 165 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AC109446.1-201ENST00000566172 220 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.37□□□□□ -2.19
CTDNEP1O95476 MIR3923-201ENST00000579521 83 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AL133215.3-201ENST00000609801 448 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AC084782.3-201ENST00000612282 578 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AC005520.5-201ENST00000613926 164 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AL353770.2-201ENST00000620024 78 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AL136221.1-201ENST00000621449 509 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 AC027514.1-201ENST00000588561 1603 ntBASIC1.37□□□□□ -2.19
CTDNEP1O95476 MIR340-201ENST00000362125 95 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 SNORD50.1-201ENST00000362987 71 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 Y_RNA.505-201ENST00000384489 102 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 MIR487A-201ENST00000385009 80 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 MIR549A-201ENST00000385268 96 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CTDNEP1O95476 SNORA12.2-201ENST00000391040 156 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 RNU11-3P-201ENST00000391111 133 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 BTF3L4P2-201ENST00000392798 346 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 MIR1277-201ENST00000408536 78 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 RNU2-41P-201ENST00000410991 178 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 FCF1P9-201ENST00000412546 282 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 RPL30P16-201ENST00000419341 429 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 ZNF885P-201ENST00000420174 1098 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC012306.1-201ENST00000423267 114 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 HMGN2P18-201ENST00000450680 270 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 HSPE1P24-201ENST00000450782 238 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.36□□□□□ -2.19
CTDNEP1O95476 RPL36AP21-201ENST00000490372 323 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 MTCO1P29-201ENST00000496868 288 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 TRBVA-201ENST00000498804 316 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC093852.1-201ENST00000503587 266 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 RNU6-864P-201ENST00000516256 108 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC087441.2-201ENST00000529141 262 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC021231.3-201ENST00000558497 370 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.36□□□□□ -2.19
CTDNEP1O95476 CYP4A27P-201ENST00000567218 190 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC146944.4-201ENST00000602697 718 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC016925.2-201ENST00000605108 242 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC009994.1-201ENST00000606889 253 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 MIR8076-201ENST00000611401 83 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC002553.4-201ENST00000616896 331 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 AC006504.8-201ENST00000621046 635 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.36□□□□□ -2.19
CTDNEP1O95476 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.36□□□□□ -2.19
CTDNEP1O95476 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.35□□□□□ -2.19
CTDNEP1O95476 SNORD114-6-201ENST00000364393 72 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 SNORD116-11-201ENST00000383882 92 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 RNU6-128P-201ENST00000383976 107 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 RNU6-26P-201ENST00000383985 107 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 MIR521-1-201ENST00000384902 87 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms