Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.32□□□□□ -2.36
PCF11O94913 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
PCF11O94913 RNU1-76P-201ENST00000362903 159 ntBASIC0.32□□□□□ -2.36
PCF11O94913 RNU6-48P-201ENST00000384161 107 ntBASIC0.32□□□□□ -2.36
PCF11O94913 RNU6-378P-201ENST00000384324 107 ntBASIC0.32□□□□□ -2.36
PCF11O94913 RNU6-163P-201ENST00000384396 106 ntBASIC0.32□□□□□ -2.36
PCF11O94913 MIR1468-201ENST00000410600 86 ntBASIC0.32□□□□□ -2.36
PCF11O94913 AC092423.1-201ENST00000430165 186 ntBASIC0.32□□□□□ -2.36
PCF11O94913 U7.7-201ENST00000459276 60 ntBASIC0.32□□□□□ -2.36
PCF11O94913 SRRM1P2-201ENST00000464531 1192 ntBASIC0.32□□□□□ -2.36
PCF11O94913 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.32□□□□□ -2.36
PCF11O94913 AC013828.2-201ENST00000532487 235 ntBASIC0.32□□□□□ -2.36
PCF11O94913 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.32□□□□□ -2.36
PCF11O94913 AC123904.2-201ENST00000548059 300 ntBASIC0.32□□□□□ -2.36
PCF11O94913 AL162424.1-201ENST00000602325 221 ntBASIC0.32□□□□□ -2.36
PCF11O94913 CTHRC1P1-201ENST00000605383 469 ntBASIC0.32□□□□□ -2.36
PCF11O94913 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.31□□□□□ -2.36
PCF11O94913 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
PCF11O94913 RNU6-969P-201ENST00000383900 105 ntBASIC0.31□□□□□ -2.36
PCF11O94913 MIR653-201ENST00000385279 96 ntBASIC0.31□□□□□ -2.36
PCF11O94913 RPEP5-201ENST00000441137 268 ntBASIC0.31□□□□□ -2.36
PCF11O94913 AC022364.2-201ENST00000457963 554 ntBASIC0.31□□□□□ -2.36
PCF11O94913 snoU13.11-201ENST00000459219 104 ntBASIC0.31□□□□□ -2.36
PCF11O94913 AL163973.1-201ENST00000484753 577 ntBASIC0.31□□□□□ -2.36
PCF11O94913 RPS26P48-201ENST00000491713 339 ntBASIC0.31□□□□□ -2.36
PCF11O94913 AC016632.1-201ENST00000503994 196 ntBASIC0.31□□□□□ -2.36
PCF11O94913 AC107934.1-201ENST00000522215 217 ntBASIC0.31□□□□□ -2.36
PCF11O94913 SNORA59B-202ENST00000578183 701 ntBASIC0.31□□□□□ -2.36
PCF11O94913 AC005520.5-201ENST00000613926 164 ntBASIC0.31□□□□□ -2.36
PCF11O94913 AL357075.2-201ENST00000614906 189 ntBASIC0.31□□□□□ -2.36
PCF11O94913 AC006386.1-201ENST00000619436 415 ntBASIC0.31□□□□□ -2.36
PCF11O94913 AC136475.10-201ENST00000620253 385 ntBASIC0.31□□□□□ -2.36
PCF11O94913 AC097372.5-201ENST00000623665 376 ntBASIC0.31□□□□□ -2.36
PCF11O94913 MIR6516-201ENST00000630554 81 ntBASIC0.31□□□□□ -2.36
PCF11O94913 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
PCF11O94913 RNU6-545P-201ENST00000362681 104 ntBASIC0.3□□□□□ -2.36
PCF11O94913 RNU6-562P-201ENST00000362731 107 ntBASIC0.3□□□□□ -2.36
PCF11O94913 Y_RNA.363-201ENST00000365529 113 ntBASIC0.3□□□□□ -2.36
PCF11O94913 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
PCF11O94913 RNU6-607P-201ENST00000411283 108 ntBASIC0.3□□□□□ -2.36
PCF11O94913 AL133396.1-201ENST00000432048 687 ntBASIC0.3□□□□□ -2.36
PCF11O94913 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.3□□□□□ -2.36
PCF11O94913 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.3□□□□□ -2.36
PCF11O94913 AL360271.2-201ENST00000447710 161 ntBASIC0.3□□□□□ -2.36
PCF11O94913 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.3□□□□□ -2.36
PCF11O94913 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.3□□□□□ -2.36
PCF11O94913 RNU6-123P-201ENST00000516163 102 ntBASIC0.3□□□□□ -2.36
PCF11O94913 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
PCF11O94913 RNU1-142P-201ENST00000516682 145 ntBASIC0.3□□□□□ -2.36
PCF11O94913 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.3□□□□□ -2.36
PCF11O94913 AL357312.1-201ENST00000603879 298 ntBASIC0.3□□□□□ -2.36
PCF11O94913 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
PCF11O94913 AC116165.2-201ENST00000616705 206 ntBASIC0.3□□□□□ -2.36
PCF11O94913 AL136221.1-201ENST00000621449 509 ntBASIC0.3□□□□□ -2.36
PCF11O94913 RNU6-1237P-201ENST00000384777 107 ntBASIC0.29□□□□□ -2.36
PCF11O94913 RNA5SP323-201ENST00000391094 133 ntBASIC0.29□□□□□ -2.36
PCF11O94913 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.29□□□□□ -2.36
PCF11O94913 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.29□□□□□ -2.36
PCF11O94913 NFU1P2-201ENST00000448700 469 ntBASIC0.29□□□□□ -2.36
PCF11O94913 RNU7-21P-201ENST00000459430 62 ntBASIC0.29□□□□□ -2.36
PCF11O94913 RNA5SP67-201ENST00000516422 131 ntBASIC0.29□□□□□ -2.36
PCF11O94913 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.29□□□□□ -2.36
PCF11O94913 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.29□□□□□ -2.36
PCF11O94913 MIR3118-1-201ENST00000581787 76 ntBASIC0.29□□□□□ -2.36
PCF11O94913 MIR4753-201ENST00000585119 83 ntBASIC0.29□□□□□ -2.36
PCF11O94913 PRELID3BP2-201ENST00000605362 201 ntBASIC0.29□□□□□ -2.36
PCF11O94913 snoU2-30.2-201ENST00000362805 70 ntBASIC0.28□□□□□ -2.36
PCF11O94913 SNORD56.2-201ENST00000363242 71 ntBASIC0.28□□□□□ -2.36
PCF11O94913 SNORD18A-201ENST00000363753 72 ntBASIC0.28□□□□□ -2.36
PCF11O94913 RNY4P16-201ENST00000364768 94 ntBASIC0.28□□□□□ -2.36
PCF11O94913 RNU2-39P-201ENST00000410604 198 ntBASIC0.28□□□□□ -2.36
PCF11O94913 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.28□□□□□ -2.36
PCF11O94913 C1DP2-201ENST00000418167 426 ntBASIC0.28□□□□□ -2.36
PCF11O94913 SNORD114-31-201ENST00000363219 75 ntBASIC0.28□□□□□ -2.37
PCF11O94913 CDK8P2-201ENST00000415020 547 ntBASIC0.28□□□□□ -2.37
PCF11O94913 AL031779.1-201ENST00000415663 330 ntBASIC0.28□□□□□ -2.37
PCF11O94913 AC010154.1-201ENST00000425857 269 ntBASIC0.28□□□□□ -2.37
PCF11O94913 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.28□□□□□ -2.37
PCF11O94913 AC233266.1-201ENST00000454518 96 ntBASIC0.28□□□□□ -2.37
PCF11O94913 MTND1P12-201ENST00000455231 147 ntBASIC0.28□□□□□ -2.37
PCF11O94913 C1DP4-201ENST00000455429 424 ntBASIC0.28□□□□□ -2.37
PCF11O94913 MTND3P25-201ENST00000509243 135 ntBASIC0.28□□□□□ -2.37
PCF11O94913 AC117522.1-201ENST00000509821 380 ntBASIC0.28□□□□□ -2.37
PCF11O94913 AC104136.1-201ENST00000512969 394 ntBASIC0.28□□□□□ -2.37
PCF11O94913 RNU6-922P-201ENST00000516753 99 ntBASIC0.28□□□□□ -2.37
PCF11O94913 AC090049.2-201ENST00000550377 109 ntBASIC0.28□□□□□ -2.37
PCF11O94913 MIR4307-201ENST00000582802 84 ntBASIC0.28□□□□□ -2.37
PCF11O94913 MIR4768-201ENST00000585270 74 ntBASIC0.28□□□□□ -2.37
PCF11O94913 AC242852.1-201ENST00000612151 96 ntBASIC0.28□□□□□ -2.37
PCF11O94913 AL513423.1-201ENST00000621695 132 ntBASIC0.28□□□□□ -2.37
PCF11O94913 AC244015.1-201ENST00000622301 99 ntBASIC0.28□□□□□ -2.37
PCF11O94913 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.28□□□□□ -2.37
PCF11O94913 RNU4-76P-201ENST00000364509 141 ntBASIC0.27□□□□□ -2.37
PCF11O94913 MIR1253-201ENST00000408273 105 ntBASIC0.27□□□□□ -2.37
PCF11O94913 MIR1283-1-201ENST00000408494 87 ntBASIC0.27□□□□□ -2.37
PCF11O94913 AL035398.1-201ENST00000430869 322 ntBASIC0.27□□□□□ -2.37
PCF11O94913 AC022493.2-201ENST00000506122 481 ntBASIC0.27□□□□□ -2.37
PCF11O94913 AL139022.2-201ENST00000606934 443 ntBASIC0.27□□□□□ -2.37
PCF11O94913 AC009509.4-201ENST00000619202 509 ntBASIC0.27□□□□□ -2.37
PCF11O94913 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms