Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC002075.2-201ENST00000425207 252 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 YME1L1P1-201ENST00000429435 297 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 RN7SL271P-201ENST00000487601 295 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 RNU5F-4P-201ENST00000516581 114 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 AP003730.1-201ENST00000524605 285 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.51□□□□□ -1.69
ACTN4O43707 HIGD1AP1-201ENST00000550979 275 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 RNU6-94P-201ENST00000607728 107 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.51□□□□□ -1.69
ACTN4O43707 AL589743.1-201ENST00000551932 2712 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.5□□□□□ -1.69
ACTN4O43707 SNORA60-201ENST00000362396 134 ntBASIC4.5□□□□□ -1.69
ACTN4O43707 Y_RNA.111-201ENST00000363248 100 ntBASIC4.5□□□□□ -1.69
ACTN4O43707 Y_RNA.203-201ENST00000364106 102 ntBASIC4.5□□□□□ -1.69
ACTN4O43707 SNORD14D-201ENST00000384390 87 ntBASIC4.5□□□□□ -1.69
ACTN4O43707 RNY1P7-201ENST00000384743 110 ntBASIC4.5□□□□□ -1.69
ACTN4O43707 RPL18P10-201ENST00000425606 538 ntBASIC4.5□□□□□ -1.69
ACTN4O43707 AC083863.1-201ENST00000438811 231 ntBASIC4.5□□□□□ -1.69
ACTN4O43707 COX6CP6-201ENST00000490840 228 ntBASIC4.5□□□□□ -1.69
ACTN4O43707 CYCSP29-201ENST00000533731 318 ntBASIC4.5□□□□□ -1.69
ACTN4O43707 MIR4662B-201ENST00000579498 81 ntBASIC4.5□□□□□ -1.69
ACTN4O43707 RNU1-30P-201ENST00000606575 163 ntBASIC4.5□□□□□ -1.69
ACTN4O43707 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ACTN4O43707 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ACTN4O43707 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ACTN4O43707 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
ACTN4O43707 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
ACTN4O43707 Y_RNA.323-201ENST00000365157 109 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 SNORA56-201ENST00000383966 129 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 RNU6-820P-201ENST00000384273 107 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 MIR3074-201ENST00000384885 81 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.49□□□□□ -1.69
ACTN4O43707 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.49□□□□□ -1.69
ACTN4O43707 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
ACTN4O43707 AC078817.1-201ENST00000492623 435 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 RNU6-1146P-201ENST00000516282 102 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 RNU6-365P-201ENST00000517113 106 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 AC107934.2-201ENST00000518653 310 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.49□□□□□ -1.69
ACTN4O43707 AC015720.1-201ENST00000565251 277 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 MIR6868-201ENST00000611215 58 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ACTN4O43707 UBE3AP2-201ENST00000429033 2259 ntBASIC4.49□□□□□ -1.69
ACTN4O43707 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.49□□□□□ -1.69
ACTN4O43707 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.48□□□□□ -1.69
ACTN4O43707 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
ACTN4O43707 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ACTN4O43707 RNA5SP399-201ENST00000364003 117 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 MIR450A2-201ENST00000385022 100 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 AC023141.4-201ENST00000412031 328 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 AC007064.1-201ENST00000412238 351 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 AC016397.1-201ENST00000412463 242 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 AC109327.2-201ENST00000448339 378 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 SNORD11-201ENST00000459124 84 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 AC010531.2-201ENST00000465012 153 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 RPL27AP5-201ENST00000469428 449 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 RNU7-149P-201ENST00000516739 59 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 RNU6-1098P-201ENST00000516772 96 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 AC007751.1-201ENST00000529260 376 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
ACTN4O43707 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.48□□□□□ -1.69
ACTN4O43707 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.48□□□□□ -1.69
ACTN4O43707 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 AL035470.1-201ENST00000622571 220 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 AL136964.1-201ENST00000622038 2990 ntBASIC4.48□□□□□ -1.69
ACTN4O43707 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.48□□□□□ -1.69
ACTN4O43707 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ACTN4O43707 IPO8P1-201ENST00000455509 3109 ntBASIC4.47□□□□□ -1.69
ACTN4O43707 RNU1-57P-201ENST00000384491 166 ntBASIC4.47□□□□□ -1.69
ACTN4O43707 MIR1251-201ENST00000408552 70 ntBASIC4.47□□□□□ -1.69
ACTN4O43707 NDUFB1P1-201ENST00000435191 180 ntBASIC4.47□□□□□ -1.69
ACTN4O43707 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.47□□□□□ -1.69
ACTN4O43707 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.47□□□□□ -1.69
ACTN4O43707 ATP5EP1-201ENST00000510257 156 ntBASIC4.47□□□□□ -1.69
ACTN4O43707 RNU6-113P-201ENST00000516653 101 ntBASIC4.47□□□□□ -1.69
ACTN4O43707 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.47□□□□□ -1.69
ACTN4O43707 AL360157.1-201ENST00000565962 87 ntBASIC4.47□□□□□ -1.69
ACTN4O43707 MIR3129-201ENST00000581095 76 ntBASIC4.47□□□□□ -1.69
ACTN4O43707 MIR4753-201ENST00000585119 83 ntBASIC4.47□□□□□ -1.69
ACTN4O43707 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.47□□□□□ -1.69
ACTN4O43707 AL137067.1-201ENST00000615933 120 ntBASIC4.47□□□□□ -1.69
ACTN4O43707 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ACTN4O43707 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ACTN4O43707 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.47□□□□□ -1.69
ACTN4O43707 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.47□□□□□ -1.69
ACTN4O43707 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACTN4O43707 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACTN4O43707 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.46□□□□□ -1.7
ACTN4O43707 MIR29B2-201ENST00000385055 81 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 MIR300-201ENST00000401138 83 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 MIR1283-1-201ENST00000408494 87 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 RNU2-32P-201ENST00000411193 191 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 AC021205.2-201ENST00000480069 347 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 OR9P1P-201ENST00000496431 281 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 RNA5SP236-201ENST00000516169 116 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 RNU6-109P-201ENST00000516364 107 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 Vault.1-201ENST00000516474 102 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 RNU6-184P-201ENST00000516514 107 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms