Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PHF1O43189 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
PHF1O43189 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PHF1O43189 Y_RNA.112-201ENST00000363250 102 ntBASIC1.89□□□□□ -2.11
PHF1O43189 Y_RNA.197-201ENST00000364004 102 ntBASIC1.89□□□□□ -2.11
PHF1O43189 SNORA36A-201ENST00000384221 132 ntBASIC1.89□□□□□ -2.11
PHF1O43189 U8.10-201ENST00000384260 133 ntBASIC1.89□□□□□ -2.11
PHF1O43189 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PHF1O43189 MTCYBP2-201ENST00000407745 171 ntBASIC1.89□□□□□ -2.11
PHF1O43189 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.89□□□□□ -2.11
PHF1O43189 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.89□□□□□ -2.11
PHF1O43189 WARS2P1-201ENST00000429678 537 ntBASIC1.89□□□□□ -2.11
PHF1O43189 AL137792.2-201ENST00000443484 235 ntBASIC1.89□□□□□ -2.11
PHF1O43189 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.89□□□□□ -2.11
PHF1O43189 AL353752.1-201ENST00000454946 260 ntBASIC1.89□□□□□ -2.11
PHF1O43189 RPL30P15-201ENST00000457129 321 ntBASIC1.89□□□□□ -2.11
PHF1O43189 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.89□□□□□ -2.11
PHF1O43189 RNU7-193P-201ENST00000516723 65 ntBASIC1.89□□□□□ -2.11
PHF1O43189 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.89□□□□□ -2.11
PHF1O43189 SNRPGP18-201ENST00000553000 214 ntBASIC1.89□□□□□ -2.11
PHF1O43189 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.89□□□□□ -2.11
PHF1O43189 MIR4273-201ENST00000582824 84 ntBASIC1.89□□□□□ -2.11
PHF1O43189 MIR5007-201ENST00000583098 95 ntBASIC1.89□□□□□ -2.11
PHF1O43189 AC010928.2-201ENST00000588017 287 ntBASIC1.89□□□□□ -2.11
PHF1O43189 AC044792.1-201ENST00000593294 196 ntBASIC1.89□□□□□ -2.11
PHF1O43189 AL713866.2-201ENST00000603579 219 ntBASIC1.89□□□□□ -2.11
PHF1O43189 AL034555.1-201ENST00000604816 211 ntBASIC1.89□□□□□ -2.11
PHF1O43189 MIR6766-201ENST00000622641 72 ntBASIC1.89□□□□□ -2.11
PHF1O43189 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
PHF1O43189 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PHF1O43189 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.89□□□□□ -2.11
PHF1O43189 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
PHF1O43189 AC233981.2-201ENST00000611524 1614 ntBASIC1.88□□□□□ -2.11
PHF1O43189 Y_RNA.5-201ENST00000362334 102 ntBASIC1.88□□□□□ -2.11
PHF1O43189 RNU4-15P-201ENST00000362613 141 ntBASIC1.88□□□□□ -2.11
PHF1O43189 RNU6-212P-201ENST00000362642 104 ntBASIC1.88□□□□□ -2.11
PHF1O43189 RNU1-17P-201ENST00000363022 152 ntBASIC1.88□□□□□ -2.11
PHF1O43189 RNY1P16-201ENST00000363063 111 ntBASIC1.88□□□□□ -2.11
PHF1O43189 Y_RNA.146-201ENST00000363549 102 ntBASIC1.88□□□□□ -2.11
PHF1O43189 SNORD115-8-201ENST00000363856 82 ntBASIC1.88□□□□□ -2.11
PHF1O43189 Y_RNA.252-201ENST00000364556 101 ntBASIC1.88□□□□□ -2.11
PHF1O43189 RNU4-9P-201ENST00000364951 139 ntBASIC1.88□□□□□ -2.11
PHF1O43189 SNORD115-38-201ENST00000365037 82 ntBASIC1.88□□□□□ -2.11
PHF1O43189 Y_RNA.355-201ENST00000365462 98 ntBASIC1.88□□□□□ -2.11
PHF1O43189 Y_RNA.463-201ENST00000384271 102 ntBASIC1.88□□□□□ -2.11
PHF1O43189 Y_RNA.504-201ENST00000384481 104 ntBASIC1.88□□□□□ -2.11
PHF1O43189 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PHF1O43189 RNA5SP213-201ENST00000391031 106 ntBASIC1.88□□□□□ -2.11
PHF1O43189 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.88□□□□□ -2.11
PHF1O43189 AL590135.1-201ENST00000422215 156 ntBASIC1.88□□□□□ -2.11
PHF1O43189 AC018865.2-201ENST00000423631 129 ntBASIC1.88□□□□□ -2.11
PHF1O43189 AC019205.3-201ENST00000424573 156 ntBASIC1.88□□□□□ -2.11
PHF1O43189 MTND1P14-201ENST00000427400 950 ntBASIC1.88□□□□□ -2.11
PHF1O43189 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.88□□□□□ -2.11
PHF1O43189 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.88□□□□□ -2.11
PHF1O43189 GPM6BP3-201ENST00000442797 145 ntBASIC1.88□□□□□ -2.11
PHF1O43189 AC016700.2-201ENST00000446011 156 ntBASIC1.88□□□□□ -2.11
PHF1O43189 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.88□□□□□ -2.11
PHF1O43189 RPL17P19-201ENST00000489069 552 ntBASIC1.88□□□□□ -2.11
PHF1O43189 AC015911.1-201ENST00000495111 156 ntBASIC1.88□□□□□ -2.11
PHF1O43189 AC021146.2-201ENST00000504736 556 ntBASIC1.88□□□□□ -2.11
PHF1O43189 RNU6-976P-201ENST00000516086 111 ntBASIC1.88□□□□□ -2.11
PHF1O43189 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.88□□□□□ -2.11
PHF1O43189 RNU6-567P-201ENST00000516746 107 ntBASIC1.88□□□□□ -2.11
PHF1O43189 Y_RNA.701-201ENST00000516812 110 ntBASIC1.88□□□□□ -2.11
PHF1O43189 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.88□□□□□ -2.11
PHF1O43189 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.88□□□□□ -2.11
PHF1O43189 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.88□□□□□ -2.11
PHF1O43189 AC080078.3-201ENST00000605407 463 ntBASIC1.88□□□□□ -2.11
PHF1O43189 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.88□□□□□ -2.11
PHF1O43189 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.88□□□□□ -2.11
PHF1O43189 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PHF1O43189 AC092881.1-201ENST00000638218 2733 ntBASIC1.87□□□□□ -2.11
PHF1O43189 MIR337-201ENST00000362281 93 ntBASIC1.87□□□□□ -2.11
PHF1O43189 RNU6-490P-201ENST00000362985 107 ntBASIC1.87□□□□□ -2.11
PHF1O43189 SNORA16B-201ENST00000364674 135 ntBASIC1.87□□□□□ -2.11
PHF1O43189 RNA5SP125-201ENST00000364843 120 ntBASIC1.87□□□□□ -2.11
PHF1O43189 RNU6-17P-201ENST00000384245 107 ntBASIC1.87□□□□□ -2.11
PHF1O43189 RNU6-18P-201ENST00000384527 107 ntBASIC1.87□□□□□ -2.11
PHF1O43189 Y_RNA.577-201ENST00000384794 101 ntBASIC1.87□□□□□ -2.11
PHF1O43189 MIR218-1-201ENST00000384999 110 ntBASIC1.87□□□□□ -2.11
PHF1O43189 MIR221-201ENST00000385135 110 ntBASIC1.87□□□□□ -2.11
PHF1O43189 SNORA26.9-201ENST00000391322 122 ntBASIC1.87□□□□□ -2.11
PHF1O43189 AC012306.1-201ENST00000423267 114 ntBASIC1.87□□□□□ -2.11
PHF1O43189 Z82188.1-201ENST00000436709 154 ntBASIC1.87□□□□□ -2.11
PHF1O43189 AC018634.1-201ENST00000437554 401 ntBASIC1.87□□□□□ -2.11
PHF1O43189 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.87□□□□□ -2.11
PHF1O43189 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.87□□□□□ -2.11
PHF1O43189 AC027575.1-201ENST00000481064 460 ntBASIC1.87□□□□□ -2.11
PHF1O43189 AC022493.2-201ENST00000506122 481 ntBASIC1.87□□□□□ -2.11
PHF1O43189 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
PHF1O43189 SNORA25.11-201ENST00000515935 105 ntBASIC1.87□□□□□ -2.11
PHF1O43189 RNU6-1170P-201ENST00000515974 106 ntBASIC1.87□□□□□ -2.11
PHF1O43189 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.87□□□□□ -2.11
PHF1O43189 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.87□□□□□ -2.11
PHF1O43189 AL590705.4-201ENST00000532209 134 ntBASIC1.87□□□□□ -2.11
PHF1O43189 AC069294.1-201ENST00000608397 350 ntBASIC1.87□□□□□ -2.11
PHF1O43189 RMST_6.1-201ENST00000611980 203 ntBASIC1.87□□□□□ -2.11
PHF1O43189 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.87□□□□□ -2.11
PHF1O43189 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms