Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RNU1-123P-201ENST00000458950 160 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 SRRM1P2-201ENST00000464531 1192 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 RPS26P55-201ENST00000471178 356 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 HMGN2P9-201ENST00000476875 229 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 AL163540.1-201ENST00000485382 386 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 Y_RNA.654-201ENST00000497848 106 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 RNA5SP445-201ENST00000515889 115 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 RNA5SP384-201ENST00000516615 116 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.45□□□□□ -2.18
CLDN3O15551 AP003033.1-201ENST00000527244 415 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.45□□□□□ -2.18
CLDN3O15551 MRPS36P4-201ENST00000534436 298 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.45□□□□□ -2.18
CLDN3O15551 AL157687.1-201ENST00000554853 619 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.45□□□□□ -2.18
CLDN3O15551 RN7SKP299-201ENST00000606679 301 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 AC092807.2-201ENST00000609367 243 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 AC017083.3-201ENST00000609955 700 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 TCL6_2.1-201ENST00000615162 119 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
CLDN3O15551 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CLDN3O15551 BX322639.1-202ENST00000423987 2213 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 RNU5B-2P-201ENST00000363036 113 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 RNU6-1322P-201ENST00000364309 107 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 SNORA69-201ENST00000383895 132 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 RNU6-1042P-201ENST00000384204 107 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 RNU6-933P-201ENST00000384424 107 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 MIR521-1-201ENST00000384902 87 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 RPL23AP36-201ENST00000413895 458 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 Z82205.1-201ENST00000428456 297 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 AC069257.2-201ENST00000441819 155 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 AC016717.1-201ENST00000448918 286 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 AC114982.1-201ENST00000469402 321 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 AC083798.1-201ENST00000472671 131 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 AC079140.2-201ENST00000506193 142 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 AC108729.3-201ENST00000513484 108 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 RNU2-34P-201ENST00000516534 121 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 AC019176.1-201ENST00000518519 225 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 AC104383.1-201ENST00000530297 370 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.44□□□□□ -2.18
CLDN3O15551 AP001330.5-201ENST00000607176 411 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 AC095038.3-201ENST00000634439 195 ntBASIC1.44□□□□□ -2.18
CLDN3O15551 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
CLDN3O15551 AP000568.1-201ENST00000282964 442 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AL391987.6-201ENST00000305671 199 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 SNORD1A-201ENST00000364968 72 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 RNU4-20P-201ENST00000365601 151 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 RNU6-331P-201ENST00000384724 107 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AL117342.1-201ENST00000404861 406 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.43□□□□□ -2.18
CLDN3O15551 CST2P1-201ENST00000425770 87 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.43□□□□□ -2.18
CLDN3O15551 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.43□□□□□ -2.18
CLDN3O15551 AC245517.4-201ENST00000448601 281 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 TPT1P7-201ENST00000458300 517 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.43□□□□□ -2.18
CLDN3O15551 RNU6-948P-201ENST00000516374 107 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CLDN3O15551 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.43□□□□□ -2.18
CLDN3O15551 RRN3P3-201ENST00000549207 578 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.43□□□□□ -2.18
CLDN3O15551 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.43□□□□□ -2.18
CLDN3O15551 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.43□□□□□ -2.18
CLDN3O15551 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.43□□□□□ -2.18
CLDN3O15551 MIR3611-201ENST00000584484 83 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AC016727.1-205ENST00000605437 569 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 PRR13P7-201ENST00000605538 430 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AL157834.3-201ENST00000615543 103 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AC009509.4-201ENST00000619202 509 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AL353770.2-201ENST00000620024 78 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 AL121890.5-201ENST00000620848 304 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 OR5AK4P-201ENST00000635912 903 ntBASIC1.43□□□□□ -2.18
CLDN3O15551 SNORA63D-201ENST00000364359 132 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLDN3O15551 DEFB108C-201ENST00000400154 252 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 RNU6-325P-201ENST00000411132 105 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 RPS26P42-201ENST00000413485 326 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 MTATP6P17-201ENST00000431030 672 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 AL135790.2-201ENST00000437701 267 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.42□□□□□ -2.18
CLDN3O15551 NFU1P2-201ENST00000448700 469 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 MTND3P16-201ENST00000452205 344 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 MTCO3P8-201ENST00000453691 755 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 snoU13.27-201ENST00000459278 104 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 AC091885.1-201ENST00000506658 268 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 AC092436.3-201ENST00000511788 257 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 RNU6-1332P-201ENST00000516666 104 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 RNU6-902P-201ENST00000517212 91 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 AC026407.1-201ENST00000518369 204 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.42□□□□□ -2.18
CLDN3O15551 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 MIR3937-201ENST00000580135 106 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 FGF7P1-201ENST00000582820 288 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.42□□□□□ -2.18
CLDN3O15551 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.42□□□□□ -2.18
CLDN3O15551 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.42□□□□□ -2.18
CLDN3O15551 MIR6863-201ENST00000636112 90 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms