Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RNU6-975P-201ENST00000384296 105 ntBASIC1.13□□□□□ -2.23
CLOCKO15516 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
CLOCKO15516 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.13□□□□□ -2.23
CLOCKO15516 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.13□□□□□ -2.23
CLOCKO15516 AC004386.2-201ENST00000441858 148 ntBASIC1.13□□□□□ -2.23
CLOCKO15516 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.13□□□□□ -2.23
CLOCKO15516 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.13□□□□□ -2.23
CLOCKO15516 MTCO2P18-201ENST00000457151 658 ntBASIC1.13□□□□□ -2.23
CLOCKO15516 AC010493.1-201ENST00000513479 292 ntBASIC1.13□□□□□ -2.23
CLOCKO15516 MIR4424-201ENST00000585257 86 ntBASIC1.13□□□□□ -2.23
CLOCKO15516 AC087683.1-201ENST00000591187 441 ntBASIC1.13□□□□□ -2.23
CLOCKO15516 AC016727.2-201ENST00000603988 621 ntBASIC1.13□□□□□ -2.23
CLOCKO15516 AL354950.2-201ENST00000617939 290 ntBASIC1.13□□□□□ -2.23
CLOCKO15516 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CLOCKO15516 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 AL606923.1-201ENST00000406616 190 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 RNA5SP494-201ENST00000410653 129 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 RN7SKP142-201ENST00000411236 328 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 MRPL35P3-201ENST00000421557 364 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.12□□□□□ -2.23
CLOCKO15516 MTND2P9-201ENST00000422293 931 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 SNX2P2-201ENST00000424553 323 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 USP9YP14-201ENST00000430663 563 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.12□□□□□ -2.23
CLOCKO15516 AC114982.1-201ENST00000469402 321 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 AC087854.1-201ENST00000519706 414 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.12□□□□□ -2.23
CLOCKO15516 LRRC34P1-201ENST00000542742 915 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 CYP3A52P-201ENST00000563326 91 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 MIR4709-201ENST00000577272 72 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 MIR4528-201ENST00000577763 90 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
CLOCKO15516 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CLOCKO15516 snoU2-30.2-201ENST00000362805 70 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 Y_RNA.224-201ENST00000364308 111 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 SNORA4.2-201ENST00000365313 147 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 RNU6-1103P-201ENST00000384150 107 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 RNU6-348P-201ENST00000384386 107 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 MIR515-2-201ENST00000384883 83 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 MIR515-1-201ENST00000384884 83 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.11□□□□□ -2.23
CLOCKO15516 MTND3P9-201ENST00000429526 346 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 AC073464.1-201ENST00000429823 534 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 NFU1P2-201ENST00000448700 469 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.11□□□□□ -2.23
CLOCKO15516 AC016717.1-201ENST00000448918 286 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 U8.21-201ENST00000459536 136 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.11□□□□□ -2.23
CLOCKO15516 AP000907.4-201ENST00000604143 237 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 AL355802.3-201ENST00000607571 545 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 AC064836.2-201ENST00000609491 462 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.11□□□□□ -2.23
CLOCKO15516 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
CLOCKO15516 RNA5SP327-201ENST00000362494 101 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 RNU6-534P-201ENST00000364877 106 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 RNU6-1286P-201ENST00000383871 107 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CLOCKO15516 RNU6-1158P-201ENST00000391167 107 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.1□□□□□ -2.23
CLOCKO15516 AC009237.7-201ENST00000447357 229 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 RPS26P45-201ENST00000471748 340 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 RNU6-189P-201ENST00000516120 101 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 RNU6-1146P-201ENST00000516282 102 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.1□□□□□ -2.23
CLOCKO15516 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.1□□□□□ -2.23
CLOCKO15516 AL512310.8-201ENST00000550183 120 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 AL442163.3-201ENST00000554110 156 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 AL391646.1-201ENST00000603860 190 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.1□□□□□ -2.23
CLOCKO15516 AC009033.1-201ENST00000624279 431 ntBASIC1.1□□□□□ -2.23
CLOCKO15516 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.1□□□□□ -2.23
CLOCKO15516 RNU6-82P-201ENST00000363970 107 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 Y_RNA.269-201ENST00000364685 89 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 RNU6-53P-201ENST00000365367 106 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 MIR513A1-201ENST00000385138 129 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 MTCO2P19-201ENST00000427513 598 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 TOMM22P2-201ENST00000430735 237 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.09□□□□□ -2.23
CLOCKO15516 HMGN2P34-201ENST00000437647 269 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.09□□□□□ -2.23
CLOCKO15516 USP9YP29-201ENST00000445112 563 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.09□□□□□ -2.23
CLOCKO15516 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.09□□□□□ -2.23
CLOCKO15516 TPTE2P5-203ENST00000458118 728 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 AC007215.1-201ENST00000464893 276 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 MTCO3P38-201ENST00000468910 766 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.09□□□□□ -2.23
CLOCKO15516 AL163195.1-201ENST00000496941 348 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 SCOCP1-201ENST00000554676 349 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 AC145350.1-201ENST00000567426 208 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 AC087752.4-201ENST00000605911 462 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 AL365434.2-201ENST00000607979 234 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 AC103705.1-201ENST00000619013 241 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 MIR8065-201ENST00000620577 100 ntBASIC1.09□□□□□ -2.23
CLOCKO15516 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.24
CLOCKO15516 RNU6-1329P-201ENST00000365664 107 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms