Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.44□□□□□ -2.48
HMGN4O00479 MIR145-201ENST00000384967 88 ntBASIC-0.44□□□□□ -2.48
HMGN4O00479 MIR1185-1-201ENST00000408598 86 ntBASIC-0.44□□□□□ -2.48
HMGN4O00479 AL353777.1-201ENST00000425552 326 ntBASIC-0.44□□□□□ -2.48
HMGN4O00479 AC244670.1-201ENST00000436879 112 ntBASIC-0.44□□□□□ -2.48
HMGN4O00479 AP003049.1-201ENST00000529418 457 ntBASIC-0.44□□□□□ -2.48
HMGN4O00479 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
HMGN4O00479 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.44□□□□□ -2.48
HMGN4O00479 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.44□□□□□ -2.48
HMGN4O00479 MIR3612-201ENST00000579753 87 ntBASIC-0.44□□□□□ -2.48
HMGN4O00479 BCRP9-201ENST00000605312 388 ntBASIC-0.44□□□□□ -2.48
HMGN4O00479 RNU6-679P-201ENST00000391003 106 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 MIR1283-1-201ENST00000408494 87 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 SNORD83.1-201ENST00000411362 77 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.45□□□□□ -2.48
HMGN4O00479 CDK8P2-201ENST00000415020 547 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.45□□□□□ -2.48
HMGN4O00479 AL354692.1-201ENST00000423044 315 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 AL590632.1-201ENST00000424289 371 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 AC112206.4-201ENST00000515142 405 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 RNU1-117P-201ENST00000517041 158 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 AC004584.2-201ENST00000570407 410 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 MIR4764-201ENST00000580680 88 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.45□□□□□ -2.48
HMGN4O00479 AC104695.3-201ENST00000604052 296 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 AP002360.4-201ENST00000606980 481 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 SNORA25.18-201ENST00000607153 114 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 MIR8076-201ENST00000611401 83 ntBASIC-0.45□□□□□ -2.48
HMGN4O00479 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
HMGN4O00479 AC092104.1-201ENST00000497346 1441 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 MIR16-2-201ENST00000362117 81 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 SNORA9.1-201ENST00000362412 131 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 RNU6-378P-201ENST00000384324 107 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 AL663109.1-201ENST00000411498 844 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 MTCO1P17-201ENST00000411522 491 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.46□□□□□ -2.48
HMGN4O00479 AC114878.1-201ENST00000441166 358 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 AL049829.1-201ENST00000465411 156 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 SCARNA8-201ENST00000515924 131 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 RNY4P37-201ENST00000516225 96 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 RNU6-320P-201ENST00000516511 106 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.46□□□□□ -2.48
HMGN4O00479 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.46□□□□□ -2.48
HMGN4O00479 AC104072.1-201ENST00000568817 668 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 AC090517.1-201ENST00000569307 266 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 AL391840.1-201ENST00000571144 367 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 MIR548AC-201ENST00000585049 88 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 MIR4753-201ENST00000585119 83 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 AL445435.1-201ENST00000604232 665 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 AC069545.1-201ENST00000605671 358 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 AC104458.1-201ENST00000608243 463 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 AC138749.5-201ENST00000611461 208 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 AL359075.3-201ENST00000613288 217 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.46□□□□□ -2.48
HMGN4O00479 RNU6-792P-201ENST00000363490 107 ntBASIC-0.47□□□□□ -2.48
HMGN4O00479 RNU6-777P-201ENST00000364265 104 ntBASIC-0.47□□□□□ -2.48
HMGN4O00479 RNU6-43P-201ENST00000384302 107 ntBASIC-0.47□□□□□ -2.48
HMGN4O00479 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.47□□□□□ -2.48
HMGN4O00479 SNORA26.3-201ENST00000391119 136 ntBASIC-0.47□□□□□ -2.48
HMGN4O00479 MIR1253-201ENST00000408273 105 ntBASIC-0.47□□□□□ -2.48
HMGN4O00479 AC010975.2-201ENST00000427781 588 ntBASIC-0.47□□□□□ -2.48
HMGN4O00479 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.47□□□□□ -2.48
HMGN4O00479 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.47□□□□□ -2.48
HMGN4O00479 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.47□□□□□ -2.48
HMGN4O00479 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.47□□□□□ -2.48
HMGN4O00479 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.47□□□□□ -2.48
HMGN4O00479 AC122133.1-201ENST00000613964 233 ntBASIC-0.47□□□□□ -2.48
HMGN4O00479 FRG1KP-201ENST00000623592 341 ntBASIC-0.47□□□□□ -2.48
HMGN4O00479 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.47□□□□□ -2.48
HMGN4O00479 SNORD113.3-201ENST00000364630 78 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 RNU6-946P-201ENST00000383878 107 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 SNORA75.6-201ENST00000391318 127 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 AL953862.1-201ENST00000423016 168 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 AC078809.1-201ENST00000427601 140 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.48□□□□□ -2.49
HMGN4O00479 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.48□□□□□ -2.49
HMGN4O00479 AC104692.1-201ENST00000472406 90 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 MTCO3P15-201ENST00000526563 574 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.48□□□□□ -2.49
HMGN4O00479 MIR4743-201ENST00000584576 69 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 RBM11P1-201ENST00000604951 799 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 PART1_2.1-201ENST00000612397 250 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 AC023158.2-201ENST00000614876 543 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 uc_338.16-201ENST00000621804 95 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 AC006001.4-201ENST00000622243 395 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 AC011155.2-201ENST00000623202 216 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 AL450472.1-202ENST00000637286 180 ntBASIC-0.48□□□□□ -2.49
HMGN4O00479 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.48□□□□□ -2.49
HMGN4O00479 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.49□□□□□ -2.49
HMGN4O00479 RNU6-562P-201ENST00000362731 107 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 RNU6-833P-201ENST00000363486 107 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 RNU6-105P-201ENST00000363909 104 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 RNU6-650P-201ENST00000365658 111 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms