Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC009509.4-201ENST00000619202 509 ntBASIC0.93□□□□□ -2.26
DFFAO00273 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.93□□□□□ -2.26
DFFAO00273 MIR96-201ENST00000362288 78 ntBASIC0.92□□□□□ -2.26
DFFAO00273 Y_RNA.4-201ENST00000362333 112 ntBASIC0.92□□□□□ -2.26
DFFAO00273 RNU6-1123P-201ENST00000362347 106 ntBASIC0.92□□□□□ -2.26
DFFAO00273 Y_RNA.201-201ENST00000364052 96 ntBASIC0.92□□□□□ -2.26
DFFAO00273 RNA5SP259-201ENST00000365541 109 ntBASIC0.92□□□□□ -2.26
DFFAO00273 RNU6-517P-201ENST00000384362 110 ntBASIC0.92□□□□□ -2.26
DFFAO00273 AL356776.1-201ENST00000406574 447 ntBASIC0.92□□□□□ -2.26
DFFAO00273 RPS26P42-201ENST00000413485 326 ntBASIC0.92□□□□□ -2.26
DFFAO00273 MTND2P18-201ENST00000419962 1030 ntBASIC0.92□□□□□ -2.26
DFFAO00273 AL365203.2-201ENST00000423444 196 ntBASIC0.92□□□□□ -2.26
DFFAO00273 MTND4P32-201ENST00000437189 1237 ntBASIC0.92□□□□□ -2.26
DFFAO00273 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.92□□□□□ -2.26
DFFAO00273 HMGN2P34-201ENST00000437647 269 ntBASIC0.92□□□□□ -2.26
DFFAO00273 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.92□□□□□ -2.26
DFFAO00273 AC004386.2-201ENST00000441858 148 ntBASIC0.92□□□□□ -2.26
DFFAO00273 AC114982.1-201ENST00000469402 321 ntBASIC0.92□□□□□ -2.26
DFFAO00273 HMGN1P12-201ENST00000499125 195 ntBASIC0.92□□□□□ -2.26
DFFAO00273 RNU6-323P-201ENST00000521915 107 ntBASIC0.92□□□□□ -2.26
DFFAO00273 MIR5006-201ENST00000583027 110 ntBASIC0.92□□□□□ -2.26
DFFAO00273 TCL6_2.1-201ENST00000615162 119 ntBASIC0.92□□□□□ -2.26
DFFAO00273 RNU6-227P-201ENST00000362865 103 ntBASIC0.91□□□□□ -2.26
DFFAO00273 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
DFFAO00273 SNORA29-201ENST00000384183 140 ntBASIC0.91□□□□□ -2.26
DFFAO00273 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
DFFAO00273 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.91□□□□□ -2.26
DFFAO00273 RPS29P27-201ENST00000463711 170 ntBASIC0.91□□□□□ -2.26
DFFAO00273 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.91□□□□□ -2.26
DFFAO00273 RNU6-1146P-201ENST00000516282 102 ntBASIC0.91□□□□□ -2.26
DFFAO00273 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.91□□□□□ -2.26
DFFAO00273 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.91□□□□□ -2.26
DFFAO00273 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.91□□□□□ -2.26
DFFAO00273 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.91□□□□□ -2.26
DFFAO00273 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
DFFAO00273 MTATP6P3-201ENST00000581686 676 ntBASIC0.91□□□□□ -2.26
DFFAO00273 AC008536.2-201ENST00000607284 349 ntBASIC0.91□□□□□ -2.26
DFFAO00273 AC104458.1-201ENST00000608243 463 ntBASIC0.91□□□□□ -2.26
DFFAO00273 AC087683.2-201ENST00000611384 326 ntBASIC0.91□□□□□ -2.26
DFFAO00273 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.91□□□□□ -2.26
DFFAO00273 AC027335.2-201ENST00000624030 375 ntBASIC0.91□□□□□ -2.26
DFFAO00273 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.91□□□□□ -2.26
DFFAO00273 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
DFFAO00273 AL390237.1-201ENST00000404226 1415 ntBASIC0.9□□□□□ -2.26
DFFAO00273 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
DFFAO00273 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
DFFAO00273 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
DFFAO00273 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
DFFAO00273 RNU6-1120P-201ENST00000362988 108 ntBASIC0.9□□□□□ -2.27
DFFAO00273 RNU5B-2P-201ENST00000363036 113 ntBASIC0.9□□□□□ -2.27
DFFAO00273 SNORA25-201ENST00000384384 134 ntBASIC0.9□□□□□ -2.27
DFFAO00273 MIR222-201ENST00000384992 110 ntBASIC0.9□□□□□ -2.27
DFFAO00273 MIR549A-201ENST00000385268 96 ntBASIC0.9□□□□□ -2.27
DFFAO00273 SNORA26.8-201ENST00000391306 124 ntBASIC0.9□□□□□ -2.27
DFFAO00273 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.9□□□□□ -2.27
DFFAO00273 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.9□□□□□ -2.27
DFFAO00273 MTCO2P11-201ENST00000431069 680 ntBASIC0.9□□□□□ -2.27
DFFAO00273 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.9□□□□□ -2.27
DFFAO00273 AC009237.7-201ENST00000447357 229 ntBASIC0.9□□□□□ -2.27
DFFAO00273 NFU1P2-201ENST00000448700 469 ntBASIC0.9□□□□□ -2.27
DFFAO00273 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.9□□□□□ -2.27
DFFAO00273 RNU7-180P-201ENST00000459240 63 ntBASIC0.9□□□□□ -2.27
DFFAO00273 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.9□□□□□ -2.27
DFFAO00273 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.9□□□□□ -2.27
DFFAO00273 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.9□□□□□ -2.27
DFFAO00273 SNORD116-28-201ENST00000516123 91 ntBASIC0.9□□□□□ -2.27
DFFAO00273 RNU6-415P-201ENST00000516252 97 ntBASIC0.9□□□□□ -2.27
DFFAO00273 RNU6-113P-201ENST00000516653 101 ntBASIC0.9□□□□□ -2.27
DFFAO00273 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.9□□□□□ -2.27
DFFAO00273 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.9□□□□□ -2.27
DFFAO00273 AC068790.2-201ENST00000602601 557 ntBASIC0.9□□□□□ -2.27
DFFAO00273 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.9□□□□□ -2.27
DFFAO00273 AC004492.1-201ENST00000607036 742 ntBASIC0.9□□□□□ -2.27
DFFAO00273 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
DFFAO00273 AL391516.1-201ENST00000554380 2449 ntBASIC0.9□□□□□ -2.27
DFFAO00273 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
DFFAO00273 RNU1-124P-201ENST00000363861 145 ntBASIC0.89□□□□□ -2.27
DFFAO00273 RNU6-968P-201ENST00000384076 107 ntBASIC0.89□□□□□ -2.27
DFFAO00273 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
DFFAO00273 AC004866.1-201ENST00000411748 78 ntBASIC0.89□□□□□ -2.27
DFFAO00273 MTATP6P18-201ENST00000417994 673 ntBASIC0.89□□□□□ -2.27
DFFAO00273 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.89□□□□□ -2.27
DFFAO00273 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.89□□□□□ -2.27
DFFAO00273 RNU6-1037P-201ENST00000459571 107 ntBASIC0.89□□□□□ -2.27
DFFAO00273 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
DFFAO00273 AC024995.1-201ENST00000523014 93 ntBASIC0.89□□□□□ -2.27
DFFAO00273 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.89□□□□□ -2.27
DFFAO00273 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.89□□□□□ -2.27
DFFAO00273 MIR3913-1-201ENST00000577744 102 ntBASIC0.89□□□□□ -2.27
DFFAO00273 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
DFFAO00273 Z99497.2-201ENST00000603634 310 ntBASIC0.89□□□□□ -2.27
DFFAO00273 AC093424.1-201ENST00000604999 338 ntBASIC0.89□□□□□ -2.27
DFFAO00273 AL022345.2-201ENST00000606307 135 ntBASIC0.89□□□□□ -2.27
DFFAO00273 BX284668.6-201ENST00000606899 438 ntBASIC0.89□□□□□ -2.27
DFFAO00273 AC006001.4-201ENST00000622243 395 ntBASIC0.89□□□□□ -2.27
DFFAO00273 Y_RNA.287-201ENST00000364853 94 ntBASIC0.88□□□□□ -2.27
DFFAO00273 RNU6-417P-201ENST00000384712 107 ntBASIC0.88□□□□□ -2.27
DFFAO00273 RPL21P1-201ENST00000399532 476 ntBASIC0.88□□□□□ -2.27
DFFAO00273 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
DFFAO00273 MTCYBP8-201ENST00000422855 651 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms