Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PDLIM1O00151 RNU6-545P-201ENST00000362681 104 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 RNU1-76P-201ENST00000362903 159 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 Y_RNA.135-201ENST00000363439 95 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
PDLIM1O00151 MIR549A-201ENST00000385268 96 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 SNORA12.2-201ENST00000391040 156 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
PDLIM1O00151 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.64□□□□□ -2.15
PDLIM1O00151 EIF4EP2-201ENST00000422816 654 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 AC003989.2-201ENST00000440224 169 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 DAP3P1-201ENST00000441522 278 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 AC004386.2-201ENST00000441858 148 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 OR2AQ1P-201ENST00000451972 200 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.64□□□□□ -2.15
PDLIM1O00151 RPS29P25-201ENST00000481709 171 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.64□□□□□ -2.15
PDLIM1O00151 SNORA44.1-201ENST00000517031 108 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.64□□□□□ -2.15
PDLIM1O00151 GNAI2P1-201ENST00000541815 315 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.64□□□□□ -2.15
PDLIM1O00151 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.64□□□□□ -2.15
PDLIM1O00151 MIR6845-201ENST00000613182 61 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.64□□□□□ -2.15
PDLIM1O00151 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.64□□□□□ -2.15
PDLIM1O00151 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.64□□□□□ -2.15
PDLIM1O00151 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
PDLIM1O00151 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PDLIM1O00151 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PDLIM1O00151 SNORD50.1-201ENST00000362987 71 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 RNU6-306P-201ENST00000384617 107 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 MIR583-201ENST00000384846 75 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 MIR504-201ENST00000385065 83 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 MIR9-3-201ENST00000385084 90 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 SNORA26.9-201ENST00000391322 122 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 RNU6-1148P-201ENST00000410992 104 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 RPS26P42-201ENST00000413485 326 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 MTND1P4-201ENST00000435196 415 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.63□□□□□ -2.15
PDLIM1O00151 AC007677.1-201ENST00000445757 515 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.63□□□□□ -2.15
PDLIM1O00151 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 FO393415.2-201ENST00000480085 343 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 AC027575.1-201ENST00000481064 460 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.63□□□□□ -2.15
PDLIM1O00151 RNU4-49P-201ENST00000516080 140 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 RNU6-295P-201ENST00000516901 104 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.63□□□□□ -2.15
PDLIM1O00151 AC026470.2-201ENST00000561492 181 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.63□□□□□ -2.15
PDLIM1O00151 MIR3169-201ENST00000578032 83 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 MIR4273-201ENST00000582824 84 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 RMST_6.1-201ENST00000611980 203 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.63□□□□□ -2.15
PDLIM1O00151 TCL6_2.1-201ENST00000615162 119 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 AC006504.8-201ENST00000621046 635 ntBASIC1.63□□□□□ -2.15
PDLIM1O00151 Y_RNA.86-201ENST00000363020 111 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 MIR320B2-201ENST00000408479 138 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.62□□□□□ -2.15
PDLIM1O00151 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.62□□□□□ -2.15
PDLIM1O00151 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.62□□□□□ -2.15
PDLIM1O00151 NFU1P2-201ENST00000448700 469 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 HSPE1P24-201ENST00000450782 238 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 AC007395.1-201ENST00000451333 677 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.62□□□□□ -2.15
PDLIM1O00151 RNU1-131P-201ENST00000458943 161 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 RNU6-566P-201ENST00000516790 107 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 RNU6-1088P-201ENST00000516850 104 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 RNA5SP454-201ENST00000517231 127 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.62□□□□□ -2.15
PDLIM1O00151 DEFB131C-201ENST00000528817 165 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
PDLIM1O00151 AC104581.2-201ENST00000572227 430 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 AC080078.2-201ENST00000603766 501 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 SNRPGP20-201ENST00000604477 205 ntBASIC1.62□□□□□ -2.15
PDLIM1O00151 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.62□□□□□ -2.15
PDLIM1O00151 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.62□□□□□ -2.15
PDLIM1O00151 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.61□□□□□ -2.15
PDLIM1O00151 MTND5P10-201ENST00000603719 1809 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
PDLIM1O00151 RNU4-9P-201ENST00000364951 139 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 MIR32-201ENST00000384965 70 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 MIR300-201ENST00000401138 83 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.61□□□□□ -2.15
PDLIM1O00151 MTCO3P8-201ENST00000453691 755 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 AC016925.1-201ENST00000458303 298 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 AC116337.1-201ENST00000509680 687 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
PDLIM1O00151 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 RNU1-54P-201ENST00000517181 120 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 AF235103.2-201ENST00000525753 346 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 AL160236.1-201ENST00000556317 195 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.61□□□□□ -2.15
PDLIM1O00151 MIR4753-201ENST00000585119 83 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.61□□□□□ -2.15
PDLIM1O00151 MIR6128-201ENST00000615528 109 ntBASIC1.61□□□□□ -2.15
PDLIM1O00151 MTND5P9-201ENST00000503854 1755 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 272.5 ms