Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AC095038.3-201ENST00000634439 195 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LRRC42Q9Y546 RNU5B-2P-201ENST00000363036 113 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 Y_RNA.132-201ENST00000363421 102 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 RNU6-82P-201ENST00000363970 107 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 RNU1-96P-201ENST00000364163 162 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 RNU6-1019P-201ENST00000364424 107 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 Y_RNA.296-201ENST00000364930 108 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 RNU6-418P-201ENST00000384035 107 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 SNORA29-201ENST00000384183 140 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 RNU6-360P-201ENST00000390944 104 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 SNORA40.6-201ENST00000391153 128 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 MIR1283-1-201ENST00000408494 87 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 RPS26P42-201ENST00000413485 326 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC090960.1-201ENST00000421072 306 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC060773.1-201ENST00000421698 310 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.06□□□□□ -2.24
LRRC42Q9Y546 MTCO1P19-201ENST00000443487 500 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.06□□□□□ -2.24
LRRC42Q9Y546 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.06□□□□□ -2.24
LRRC42Q9Y546 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC067942.3-201ENST00000512025 362 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 RN7SKP298-201ENST00000515950 94 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC087854.1-201ENST00000519706 414 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC104576.1-201ENST00000524225 88 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC084364.2-201ENST00000546924 395 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC025423.5-201ENST00000550230 219 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AP005136.1-201ENST00000579765 429 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 MIR3660-201ENST00000584845 100 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC092747.3-201ENST00000603769 301 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC016727.2-201ENST00000603988 621 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AL353149.1-201ENST00000610667 244 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC005562.2-201ENST00000618264 111 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC009509.4-201ENST00000619202 509 ntBASIC1.06□□□□□ -2.24
LRRC42Q9Y546 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.06□□□□□ -2.24
LRRC42Q9Y546 AC100821.1-201ENST00000523153 2479 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 RNU6-1317P-201ENST00000364582 104 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 RNU4-20P-201ENST00000365601 151 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 Y_RNA.378-201ENST00000365652 113 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 RNU6-1329P-201ENST00000365664 107 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 RNU6-38P-201ENST00000384085 107 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 Y_RNA.553-201ENST00000384670 102 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 MIR300-201ENST00000401138 83 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 MIR1261-201ENST00000408659 82 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 RNU4-55P-201ENST00000410731 137 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 AL161935.2-201ENST00000414627 60 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 RPS27P16-201ENST00000425758 201 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 TPT1P7-201ENST00000458300 517 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 RPL36AP21-201ENST00000490372 323 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 AC079140.3-201ENST00000511111 550 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.05□□□□□ -2.24
LRRC42Q9Y546 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.05□□□□□ -2.24
LRRC42Q9Y546 SCOCP1-201ENST00000554676 349 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.05□□□□□ -2.24
LRRC42Q9Y546 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
LRRC42Q9Y546 MIR5692C1-201ENST00000585309 91 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 AC119751.7-201ENST00000600494 245 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 Z99497.2-201ENST00000603634 310 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 AP001330.5-201ENST00000607176 411 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.05□□□□□ -2.24
LRRC42Q9Y546 MIR8063-201ENST00000621930 81 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.05□□□□□ -2.24
LRRC42Q9Y546 ICE2P2-201ENST00000483823 2787 ntBASIC1.05□□□□□ -2.24
LRRC42Q9Y546 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.05□□□□□ -2.24
LRRC42Q9Y546 SNORD1A-201ENST00000364968 72 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 Y_RNA.359-201ENST00000365498 102 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 RNU6-1286P-201ENST00000383871 107 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 RNU2-7P-201ENST00000410794 178 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 EBAG9P1-201ENST00000418955 543 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.04□□□□□ -2.24
LRRC42Q9Y546 FTH1P12-201ENST00000432137 551 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.04□□□□□ -2.24
LRRC42Q9Y546 OR2AQ1P-201ENST00000451972 200 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 RN7SKP210-201ENST00000459176 261 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AC010424.1-201ENST00000506336 297 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AC011406.1-201ENST00000512440 370 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 RNA5SP384-201ENST00000516615 116 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 RNA5SP481-201ENST00000516814 122 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AC073413.2-201ENST00000604332 360 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AC017083.3-201ENST00000609955 700 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AL121757.2-201ENST00000611223 313 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AC126177.8-201ENST00000618339 1015 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 AC078883.4-201ENST00000623218 367 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 FER-210ENST00000628534 558 ntTSL 5 BASIC1.04□□□□□ -2.24
LRRC42Q9Y546 BX322639.1-202ENST00000423987 2213 ntBASIC1.04□□□□□ -2.24
LRRC42Q9Y546 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
LRRC42Q9Y546 Y_RNA.167-201ENST00000363735 109 ntBASIC1.03□□□□□ -2.24
LRRC42Q9Y546 MIR549A-201ENST00000385268 96 ntBASIC1.03□□□□□ -2.24
LRRC42Q9Y546 SNORD37.1-201ENST00000390968 65 ntBASIC1.03□□□□□ -2.24
LRRC42Q9Y546 Y_RNA.582-201ENST00000391023 95 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms