Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 RNU6-877P-201ENST00000383868 107 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-296P-201ENST00000384608 107 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-1068P-201ENST00000410958 103 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 MRPS10P2-201ENST00000431226 381 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 USP9YP28-201ENST00000435142 589 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 AC016925.1-201ENST00000458303 298 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 AC087477.1-201ENST00000465747 340 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 SNORA19.2-201ENST00000516013 114 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-1332P-201ENST00000516666 104 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 SNORD60.2-201ENST00000516883 86 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 RNU1-92P-201ENST00000517017 135 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 AL157687.1-201ENST00000554853 619 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 AC016727.2-201ENST00000603988 621 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 FER-210ENST00000628534 558 ntTSL 5 BASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 OR5AK4P-201ENST00000635912 903 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 ZNF72P-201ENST00000425869 1908 ntBASIC1.15□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-1085P-201ENST00000363576 107 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 RNU6-1042P-201ENST00000384204 107 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 SNORD116-2-201ENST00000384274 95 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 SNORD116-6-201ENST00000384711 96 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 MTCO3P40-201ENST00000392516 676 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 RNU6-325P-201ENST00000411132 105 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 AL591806.2-201ENST00000433122 173 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 Y_RNA.654-201ENST00000497848 106 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 RNA5SP445-201ENST00000515889 115 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 Y_RNA.704-201ENST00000516851 102 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 AL050343.2-201ENST00000607338 280 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 AC124864.2-201ENST00000624736 186 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 MTND5P9-201ENST00000503854 1755 ntBASIC1.15□□□□□ -2.23
EXOSC4Q9NPD3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 ZNF209P-201ENST00000593450 2304 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 RNU1-17P-201ENST00000363022 152 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 MIR487A-201ENST00000385009 80 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 RNU6-648P-201ENST00000410190 107 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 RNA5SP494-201ENST00000410653 129 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 RPS27P16-201ENST00000425758 201 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 AC016717.1-201ENST00000448918 286 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 AC112492.4-201ENST00000456549 352 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 snoU13.30-201ENST00000458951 104 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 RNU6-1208P-201ENST00000459588 107 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 RPS26P55-201ENST00000471178 356 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 RNU6-902P-201ENST00000517212 91 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 SUMO2P18-201ENST00000518873 252 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 MTND2P38-201ENST00000522536 667 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 HMGB1P33-201ENST00000563485 527 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 FAM157A-202ENST00000615155 405 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.14□□□□□ -2.23
EXOSC4Q9NPD3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 Y_RNA.372-201ENST00000365599 102 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 MIR521-1-201ENST00000384902 87 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AC060773.1-201ENST00000421698 310 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AC004386.2-201ENST00000441858 148 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AL359672.1-201ENST00000442302 409 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AC245517.4-201ENST00000448601 281 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AC007395.1-201ENST00000451333 677 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AL161670.1-201ENST00000554348 137 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 SCOCP1-201ENST00000554676 349 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AL512360.1-201ENST00000555346 234 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 MIR5006-201ENST00000583027 110 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 RNU6-89P-201ENST00000606519 100 ntBASIC1.13□□□□□ -2.23
EXOSC4Q9NPD3 AL136221.1-201ENST00000621449 509 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms