Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNU6-256P-201ENST00000516747 97 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 HSPE1P4-201ENST00000550617 308 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 MIR3672-201ENST00000584290 82 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 AC018638.8-201ENST00000588755 281 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 AC022202.1-201ENST00000613515 211 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 AC100810.6-201ENST00000638068 285 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
NXF3Q9H4D5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
NXF3Q9H4D5 Y_RNA.4-201ENST00000362333 112 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 snoU2_19.1-201ENST00000362361 80 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 RNU6-227P-201ENST00000362865 103 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 RNU6-1317P-201ENST00000364582 104 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 RNU6-142P-201ENST00000384019 107 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 RNU6-1274P-201ENST00000384557 107 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 BTF3L4P2-201ENST00000392798 346 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 SRIP3-201ENST00000413200 219 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 USP9YP28-201ENST00000435142 589 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 MTATP6P13-201ENST00000438531 667 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.61□□□□□ -2.15
NXF3Q9H4D5 SNRPGP7-201ENST00000469016 106 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AC069439.1-201ENST00000494739 167 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 MTCO1P29-201ENST00000496868 288 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AC096745.1-201ENST00000509945 370 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AC091874.1-201ENST00000511402 339 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 RNU6-864P-201ENST00000516256 108 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 RNU6-358P-201ENST00000516564 75 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AC022616.8-201ENST00000533569 253 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.61□□□□□ -2.15
NXF3Q9H4D5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AC060780.3-201ENST00000589464 80 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AL034555.1-201ENST00000604816 211 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 uc_338.5-201ENST00000611839 155 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AC009033.1-201ENST00000624279 431 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AC090517.3-201ENST00000625170 141 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 SNORD98-201ENST00000636377 67 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AL450472.1-202ENST00000637286 180 ntBASIC1.61□□□□□ -2.15
NXF3Q9H4D5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.61□□□□□ -2.15
NXF3Q9H4D5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
NXF3Q9H4D5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
NXF3Q9H4D5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
NXF3Q9H4D5 RNU4-15P-201ENST00000362613 141 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 Y_RNA.248-201ENST00000364501 109 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 RNU4-42P-201ENST00000364738 142 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 SNORD116-11-201ENST00000383882 92 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 SNORA8-201ENST00000384574 139 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 RNA5SP212-201ENST00000391223 107 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 MIR1304-201ENST00000408243 91 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 RNU6-325P-201ENST00000411132 105 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 RNU2-32P-201ENST00000411193 191 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.6□□□□□ -2.15
NXF3Q9H4D5 AL590135.1-201ENST00000422215 156 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 AC019205.3-201ENST00000424573 156 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 HSPE1P21-201ENST00000438283 308 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 AC016700.2-201ENST00000446011 156 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 NFU1P2-201ENST00000448700 469 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 MTND1P11-201ENST00000456661 876 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 AC015911.1-201ENST00000495111 156 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 AC114801.2-201ENST00000503825 781 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 AC087441.2-201ENST00000529141 262 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 AC016256.1-201ENST00000547971 354 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 AL161670.1-201ENST00000554348 137 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 MIR3942-201ENST00000585264 109 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 AC010928.2-201ENST00000588017 287 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.6□□□□□ -2.15
NXF3Q9H4D5 AL136221.1-201ENST00000621449 509 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 SNORA43.4-201ENST00000629559 138 ntBASIC1.6□□□□□ -2.15
NXF3Q9H4D5 RNU6-562P-201ENST00000362731 107 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 Y_RNA.86-201ENST00000363020 111 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 RNU6-944P-201ENST00000364023 107 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.59□□□□□ -2.15
NXF3Q9H4D5 RNU6-831P-201ENST00000384548 107 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 RNU6-95P-201ENST00000384697 107 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
NXF3Q9H4D5 MTCYBP2-201ENST00000407745 171 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 RNU2-48P-201ENST00000410694 191 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 RNU6-321P-201ENST00000410912 106 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 RPS20P15-201ENST00000412792 311 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.59□□□□□ -2.15
NXF3Q9H4D5 AL163540.1-201ENST00000485382 386 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.59□□□□□ -2.15
NXF3Q9H4D5 SNORA31.16-201ENST00000516773 139 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.59□□□□□ -2.15
NXF3Q9H4D5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.59□□□□□ -2.15
NXF3Q9H4D5 AC078795.3-201ENST00000602913 472 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 AL359821.1-201ENST00000605519 182 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 AL133215.3-201ENST00000609801 448 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 MIR8076-201ENST00000611401 83 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 AL359314.1-201ENST00000616913 261 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 U1.36-201ENST00000620684 176 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.59□□□□□ -2.15
NXF3Q9H4D5 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.59□□□□□ -2.15
NXF3Q9H4D5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
NXF3Q9H4D5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
NXF3Q9H4D5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms