Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 HMGN2P5-201ENST00000436882 273 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
UBQLN3Q9H347 MTND1P17-201ENST00000448961 204 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 snoU13.26-201ENST00000459452 105 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 FO393415.2-201ENST00000480085 343 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 MRPS17P9-201ENST00000511924 393 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.89□□□□□ -2.11
UBQLN3Q9H347 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.89□□□□□ -2.11
UBQLN3Q9H347 MIR4448-201ENST00000584360 86 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 RPL17P51-201ENST00000605218 238 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 AC009318.2-201ENST00000610917 651 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.15-201ENST00000611544 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.16-201ENST00000613119 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.12-201ENST00000613778 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.9-201ENST00000615427 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 AC005296.1-201ENST00000616145 209 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.11-201ENST00000616345 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.2-201ENST00000616535 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.3-201ENST00000617785 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.19-201ENST00000618602 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 RNU2-1-201ENST00000618664 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.6-201ENST00000619225 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.5-201ENST00000619465 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 AC091932.3-201ENST00000624223 323 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 AL133216.2-202ENST00000634512 349 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 AC009487.4-201ENST00000624969 3585 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
UBQLN3Q9H347 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
UBQLN3Q9H347 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
UBQLN3Q9H347 MTND5P9-201ENST00000503854 1755 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 RNU1-58P-201ENST00000362413 163 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 Y_RNA.72-201ENST00000362894 103 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 RNU6-23P-201ENST00000363283 107 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 RNU6-876P-201ENST00000391295 104 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 MTND3P8-201ENST00000412909 339 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 AL035666.1-201ENST00000446195 348 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 OR2AQ1P-201ENST00000451972 200 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 AC079354.2-201ENST00000453523 154 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 UBL5P3-201ENST00000475112 231 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.88□□□□□ -2.11
UBQLN3Q9H347 RNU2-44P-201ENST00000516795 194 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.88□□□□□ -2.11
UBQLN3Q9H347 AL096840.1-201ENST00000603287 93 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 AL773524.1-201ENST00000614065 229 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 AC005562.2-201ENST00000618264 111 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 AC137590.2-201ENST00000619709 240 ntBASIC1.88□□□□□ -2.11
UBQLN3Q9H347 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.88□□□□□ -2.11
UBQLN3Q9H347 RNU1-76P-201ENST00000362903 159 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 Y_RNA.160-201ENST00000363677 92 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 Y_RNA.332-201ENST00000365271 113 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 MIR32-201ENST00000384965 70 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 MIR487A-201ENST00000385009 80 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
UBQLN3Q9H347 AL356432.1-201ENST00000405809 419 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 MIR1283-2-201ENST00000408621 87 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 AL139156.1-201ENST00000412785 841 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 RPS26P42-201ENST00000413485 326 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 AC123900.1-201ENST00000420390 96 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 AC244636.1-201ENST00000421152 228 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 AL358453.1-201ENST00000422522 250 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 EIF4EP2-201ENST00000422816 654 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 MTND1P2-201ENST00000430604 821 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 Z82188.1-201ENST00000436709 154 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 AC004386.2-201ENST00000441858 148 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.87□□□□□ -2.11
UBQLN3Q9H347 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.87□□□□□ -2.11
UBQLN3Q9H347 DEFB131C-201ENST00000528817 165 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.87□□□□□ -2.11
UBQLN3Q9H347 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.87□□□□□ -2.11
UBQLN3Q9H347 MIR5006-201ENST00000583027 110 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.87□□□□□ -2.11
UBQLN3Q9H347 CYP2C61P-201ENST00000604072 290 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.87□□□□□ -2.11
UBQLN3Q9H347 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.87□□□□□ -2.11
UBQLN3Q9H347 AL590240.4-201ENST00000616908 390 ntBASIC1.87□□□□□ -2.11
UBQLN3Q9H347 RNU6-545P-201ENST00000362681 104 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 RNU6-1059P-201ENST00000363752 98 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 SNORD114-6-201ENST00000364393 72 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 RNU4-9P-201ENST00000364951 139 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 SNORD31B-201ENST00000364977 69 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 SNORA12.2-201ENST00000391040 156 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
UBQLN3Q9H347 MIR548F5-201ENST00000408421 86 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
UBQLN3Q9H347 USP9YP30-201ENST00000430729 455 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.86□□□□□ -2.11
UBQLN3Q9H347 RPL23AP42-201ENST00000471152 471 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 MTND5P5-201ENST00000503764 376 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.86□□□□□ -2.11
UBQLN3Q9H347 AC026470.2-201ENST00000561492 181 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 AC005668.1-201ENST00000571142 476 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 U1.36-201ENST00000620684 176 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.86□□□□□ -2.11
UBQLN3Q9H347 SCARNA4-201ENST00000629045 128 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms