Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 UBBP3-201ENST00000445497 241 ntBASIC3.09□□□□□ -1.91
CCDC8Q9H0W5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC8Q9H0W5 RNU4-77P-201ENST00000516692 156 ntBASIC3.09□□□□□ -1.91
CCDC8Q9H0W5 AC023824.2-201ENST00000566185 400 ntBASIC3.09□□□□□ -1.91
CCDC8Q9H0W5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC8Q9H0W5 MIR4272-201ENST00000635924 64 ntBASIC3.09□□□□□ -1.91
CCDC8Q9H0W5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC8Q9H0W5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 RNU6-874P-201ENST00000362390 105 ntBASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 Y_RNA.31-201ENST00000362574 102 ntBASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 RNU1-62P-201ENST00000362599 164 ntBASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 Y_RNA.326-201ENST00000365176 113 ntBASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 RN7SKP123-201ENST00000410732 291 ntBASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 EIF1P2-201ENST00000428233 350 ntBASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 AC090515.1-201ENST00000465295 476 ntBASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 AP000870.1-201ENST00000472927 406 ntBASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 Y_RNA.721-201ENST00000517207 102 ntBASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 TCL6_2.1-201ENST00000615162 119 ntBASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 U2.1-201ENST00000618978 145 ntBASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC8Q9H0W5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 RNU4-82P-201ENST00000362443 140 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 SNORD56.5-201ENST00000364281 72 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 Y_RNA.358-201ENST00000365491 99 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 SNORA22B-201ENST00000383876 138 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 RNU6-26P-201ENST00000383985 107 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 Y_RNA.557-201ENST00000384680 107 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 RNA5SP213-201ENST00000391031 106 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 RNA5SP344-201ENST00000411081 104 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 AC096638.1-201ENST00000444678 216 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 GSTA11P-201ENST00000452866 669 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 SNORA31.26-201ENST00000517250 137 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 HSPE1P18-201ENST00000517602 280 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 AP002770.2-201ENST00000543613 532 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 AC090616.3-201ENST00000582184 217 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 MIR3124-201ENST00000582636 67 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 AL355297.2-201ENST00000604792 129 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 AC005562.2-201ENST00000618264 111 ntBASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC8Q9H0W5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 Y_RNA.158-201ENST00000363651 101 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 SNORA33.2-201ENST00000365413 134 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 MIR10B-201ENST00000385011 110 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 RNA5SP492-201ENST00000411330 114 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 AC104389.3-201ENST00000445629 235 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 RNU7-87P-201ENST00000459343 62 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 RNA5SP385-201ENST00000515947 110 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 AP003072.1-201ENST00000531740 145 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 AC022616.8-201ENST00000533569 253 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 AC005592.1-201ENST00000566527 1640 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 AL353621.2-201ENST00000605340 133 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 IGHVIII-44-202ENST00000636235 289 ntBASIC3.06□□□□□ -1.92
CCDC8Q9H0W5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 RNU6-546P-201ENST00000383991 107 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 RNU6-281P-201ENST00000384212 103 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 MIR628-201ENST00000385229 95 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 MRPL42P3-201ENST00000401492 326 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 AL160004.2-201ENST00000432935 350 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 RNU6-344P-201ENST00000516635 111 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 AL442163.3-201ENST00000554110 156 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 AC090517.1-201ENST00000569307 266 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 AC006504.6-201ENST00000590142 199 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 AC005296.1-201ENST00000616145 209 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 AC007742.2-201ENST00000618226 398 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 AC135776.4-201ENST00000624300 1904 ntBASIC3.05□□□□□ -1.92
CCDC8Q9H0W5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 RNU1-76P-201ENST00000362903 159 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 Y_RNA.148-201ENST00000363557 117 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 RNU6-639P-201ENST00000384074 107 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 RNY3P4-201ENST00000384428 101 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 RPL21P75-201ENST00000396599 483 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 RPL21P28-201ENST00000401418 483 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 AC112492.4-201ENST00000456549 352 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 RPL21P39-201ENST00000463605 483 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 AC087190.1-201ENST00000484462 480 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 AC107032.1-201ENST00000485945 480 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 AC093591.1-201ENST00000491435 481 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 RPL21P16-201ENST00000495531 483 ntBASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC8Q9H0W5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms