Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.59□□□□□ -2.31
NKX6-2Q9C056 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.59□□□□□ -2.31
NKX6-2Q9C056 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.59□□□□□ -2.31
NKX6-2Q9C056 AL603839.4-201ENST00000624658 1005 ntBASIC0.59□□□□□ -2.31
NKX6-2Q9C056 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.59□□□□□ -2.31
NKX6-2Q9C056 Y_RNA.124-201ENST00000363339 93 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 RNU6-1097P-201ENST00000363586 107 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 RNU6-950P-201ENST00000384651 107 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AC114482.1-201ENST00000418010 247 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 MTCO2P34-201ENST00000421994 607 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AC009961.2-201ENST00000435771 251 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AC005002.2-201ENST00000438228 269 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.58□□□□□ -2.32
NKX6-2Q9C056 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.58□□□□□ -2.32
NKX6-2Q9C056 RNU6-323P-201ENST00000521915 107 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AC024995.1-201ENST00000523014 93 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AP003072.2-201ENST00000527756 676 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.58□□□□□ -2.32
NKX6-2Q9C056 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
NKX6-2Q9C056 MIR5583-1-201ENST00000580941 59 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AC146944.4-201ENST00000602697 718 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 TCL6_2.1-201ENST00000615162 119 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 AL133216.2-202ENST00000634512 349 ntBASIC0.58□□□□□ -2.32
NKX6-2Q9C056 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.58□□□□□ -2.32
NKX6-2Q9C056 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.58□□□□□ -2.32
NKX6-2Q9C056 MTND4P4-201ENST00000439033 1366 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AL391987.6-201ENST00000305671 199 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 RNU6-1305P-201ENST00000364353 104 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 SNORD114-24-201ENST00000365029 72 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 MIR605-201ENST00000385078 83 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 SNORA11.2-201ENST00000408318 127 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC016909.1-201ENST00000415916 166 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 MTCO3P8-201ENST00000453691 755 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 SNRPFP4-201ENST00000456366 242 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC105758.1-201ENST00000506038 399 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC005178.1-201ENST00000508392 440 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 RNU6-322P-201ENST00000516010 103 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC090142.3-201ENST00000519012 385 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 MTCO3P23-201ENST00000561363 289 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC026470.2-201ENST00000561492 181 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC109446.2-201ENST00000567872 497 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC022217.4-201ENST00000604389 163 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AC092354.1-201ENST00000606057 376 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 AL359697.1-201ENST00000624879 587 ntBASIC0.57□□□□□ -2.32
NKX6-2Q9C056 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.57□□□□□ -2.32
NKX6-2Q9C056 RNU6-282P-201ENST00000365357 103 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 RNU6-456P-201ENST00000384493 107 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 Y_RNA.560-201ENST00000384689 102 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 SNORA17.3-201ENST00000391159 129 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 RNU2-9P-201ENST00000410194 145 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 HMGN1P14-201ENST00000412459 517 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
NKX6-2Q9C056 RPS3AP1-201ENST00000413190 320 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AC002429.1-201ENST00000437672 148 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AC009237.7-201ENST00000447357 229 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AC074290.1-201ENST00000448883 135 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.56□□□□□ -2.32
NKX6-2Q9C056 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.56□□□□□ -2.32
NKX6-2Q9C056 MTND2P39-201ENST00000457230 764 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AC079140.5-201ENST00000507882 310 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AC105417.1-201ENST00000514691 285 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 RNU6-612P-201ENST00000516909 102 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AC025423.5-201ENST00000550230 219 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AL391840.1-201ENST00000571144 367 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 AL390123.1-201ENST00000603216 237 ntBASIC0.56□□□□□ -2.32
NKX6-2Q9C056 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.55□□□□□ -2.32
NKX6-2Q9C056 Y_RNA.363-201ENST00000365529 113 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 SNORA12.1-201ENST00000390873 148 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 SNORA40.3-201ENST00000390964 122 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 RNA5SP494-201ENST00000410653 129 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.55□□□□□ -2.32
NKX6-2Q9C056 AP1B1P2-201ENST00000416196 106 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 AC245047.3-201ENST00000429428 127 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 MTND3P9-201ENST00000429526 346 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 CETN4P-201ENST00000432407 469 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.55□□□□□ -2.32
NKX6-2Q9C056 AC245047.7-201ENST00000440265 293 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 RNU7-167P-201ENST00000459160 62 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms